Functional clusters

Information

  • Type InterPro
  • Description Acetyl-CoA carboxylase, alpha subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_233 3 3 0.00000002982
Eucalyptus grandis Chr01 5 CH_egr_1173 2 2 0.000175582
Glycine max Gm18 5 CH_gma_258 3 5 0.00000000864381
Lupinus albus Lalb_Chr19 5 CH_lal_595 2 2 0.000314895
Salvia bowleyana GWHASIU00000003 5 CH_sbo_211 4 7 0.0000000006921
Sechium edule LG14 5 CH_sed_448 2 2 0.000428052
Sequoiadendron giganteum chr2 5 CH_sgi_770 3 3 0.00000000355983
Trochodendron aralioides group7 5 CH_tar_867 2 2 0.000600366
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_432 2 2 0.0000929238
Acer truncatum chr5 6 CH_acertr_233 3 3 0.00000002982
Eucalyptus grandis Chr01 6 CH_egr_1173 2 2 0.000175582
Glycine max Gm18 6 CH_gma_258 3 5 0.00000000864381
Lupinus albus Lalb_Chr19 6 CH_lal_595 2 2 0.000314895
Salvia bowleyana GWHASIU00000003 6 CH_sbo_211 4 7 0.0000000006921
Sechium edule LG14 6 CH_sed_448 2 2 0.000428052
Sequoiadendron giganteum chr2 6 CH_sgi_770 3 3 0.00000000355983
Trochodendron aralioides group7 6 CH_tar_867 2 2 0.000600366
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_432 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001