Functional clusters

Information

  • Type InterPro
  • Description Spermidine/spermine synthases

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-7 5 CH_aar_138 3 3 0.0000000499425
Amborella trichopoda AmTr_v1.0_scaffold00006 5 CH_atr_564 2 2 0.000476644
Brassica carinata ChrC07 5 CH_bca_585 3 3 0.000000196034
Brassica oleracea C7 5 CH_bol_227 3 3 0.0000000560911
Brassica rapa A07 5 CH_bra_562 2 2 0.00064397
Chara braunii BFEA01000036 5 CH_cbr_292 2 4 0.00043153
Lotus japonicus chr4 5 CH_lja_591 2 2 0.000715077
Nicotiana tabacum Nitab4.5_0000013 5 CH_nta_311 2 2 0.000658364
Prunus persica Pp05 5 CH_ppe_754 2 2 0.000447577
Solanum lycopersicum SL4.0ch06 5 CH_sly_937 2 2 0.000880411
Solanum pennellii Spenn-ch06 5 CH_spe_841 2 2 0.000667186
Trochodendron aralioides group16 5 CH_tar_422 3 5 0.0000118893
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_752 2 2 0.000756974
Vanilla planifolia CM028151.1 5 CH_vpl_700 2 2 0.00073888
Aethionema arabicum LG-7 6 CH_aar_138 3 3 0.0000000499425
Amborella trichopoda AmTr_v1.0_scaffold00006 6 CH_atr_564 2 2 0.000476644
Brassica carinata ChrC07 6 CH_bca_585 3 3 0.000000196034
Brassica oleracea C7 6 CH_bol_227 3 3 0.0000000560911
Brassica rapa A07 6 CH_bra_562 2 2 0.00064397
Chara braunii BFEA01000036 6 CH_cbr_292 2 4 0.00043153
Fragaria x ananassa Fvb7-2 6 CH_fan_208 4 5 0.00000000110477
Lotus japonicus chr4 6 CH_lja_591 2 2 0.000715077
Nicotiana tabacum Nitab4.5_0000013 6 CH_nta_311 2 2 0.000658364
Prunus persica Pp05 6 CH_ppe_754 2 2 0.000447577
Solanum lycopersicum SL4.0ch06 6 CH_sly_937 2 2 0.000880411
Solanum pennellii Spenn-ch06 6 CH_spe_841 2 2 0.000667186
Trochodendron aralioides group16 6 CH_tar_422 3 5 0.0000118893
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_752 2 2 0.000756974
Vanilla planifolia CM028151.1 6 CH_vpl_700 2 2 0.00073888

Available child term results

Ontology identifier Description Number of clusters
IPR030668 Spermidine/spermine synthase, eukaryotes 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001