Functional clusters
Information
- Type InterPro
- Description Lipoxygenase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_387 | 3 | 3 | 0.00000213213 |
| Actinidia chinensis | Lachesis_group24 | 5 | CH_ach_184 | 3 | 3 | 0.00000247874 |
| Actinidia chinensis | Lachesis_group20 | 5 | CH_ach_233 | 3 | 5 | 0.0000247729 |
| Aquilegia oxysepala | CHR01 | 5 | CH_aox_20 | 6 | 6 | 6.90034e-17 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 5 | CH_arhy_271 | 5 | 5 | 0.00000000000825981 |
| Amborella trichopoda | AmTr_v1.0_scaffold00103 | 5 | CH_atr_314 | 3 | 4 | 0.0000108262 |
| Amborella trichopoda | AmTr_v1.0_scaffold00022 | 5 | CH_atr_80 | 7 | 52 | 0.00000000000448789 |
| Brassica carinata | ChrC08 | 5 | CH_bca_438 | 4 | 8 | 0.0000000217818 |
| Brassica napus | C06 | 5 | CH_bna_22 | 8 | 10 | 1.49368e-22 |
| Brassica oleracea | C6 | 5 | CH_bol_62 | 5 | 6 | 0.000000000000102829 |
| Camellia sinensis var. sinensis | Chr13 | 5 | CH_camsi_776 | 3 | 4 | 0.00000706335 |
| Capsicum annuum | PGAv.1.6.scaffold1034 | 5 | CH_can_281 | 4 | 6 | 0.0000000603309 |
| Capsicum annuum | PGAv.1.6.scaffold907 | 5 | CH_can_430 | 3 | 3 | 0.00000696127 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 5 | CH_can_431 | 3 | 3 | 0.00000696127 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_40 | 8 | 8 | 2.36641e-23 |
| Carpinus fangiana | Cfa04 | 5 | CH_cfa_35 | 8 | 9 | 1.7736e-21 |
| Citrullus lanatus | CG_Chr02 | 5 | CH_cla_14 | 7 | 7 | 4.46605e-18 |
| Carica papaya | supercontig_32 | 5 | CH_cpa_226 | 3 | 3 | 0.00000616843 |
| Carica papaya | supercontig_8 | 5 | CH_cpa_246 | 3 | 4 | 0.000024662 |
| Cucumis sativus L. | chr2 | 5 | CH_csa_300 | 3 | 3 | 0.0000342433 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_7 | 12 | 13 | 1.27063e-31 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_438 | 3 | 4 | 0.00000985569 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_37 | 18 | 59 | 8.64678e-35 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_188 | 5 | 9 | 0.0000000000325023 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_23 | 9 | 10 | 1.06704e-26 |
| Malus domestica | Chr07 | 5 | CH_mdo_279 | 5 | 11 | 0.00000000101867 |
| Malus domestica | Chr05 | 5 | CH_mdo_320 | 4 | 4 | 0.00000000448354 |
| Nelumbo nucifera | chr2 | 5 | CH_nnu_130 | 4 | 6 | 0.00000000359472 |
| Nelumbo nucifera | chr7 | 5 | CH_nnu_285 | 3 | 4 | 0.00000398073 |
| Oryza sativa ssp. japonica | chr12 | 5 | CH_osa_529 | 3 | 6 | 0.0000819096 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_311 | 3 | 3 | 0.00000333063 |
| Pisum sativum | chr5LG3 | 5 | CH_psa_496 | 4 | 37 | 0.0000851636 |
| Quercus lobata | 1 | 5 | CH_qlo_247 | 7 | 9 | 1.09229e-16 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_237 | 3 | 3 | 0.00000000310517 |
| Salix brachista | GWHAAZH00000013 | 5 | CH_sbr_334 | 3 | 3 | 0.00000333554 |
| Sechium edule | LG08 | 5 | CH_sed_152 | 4 | 4 | 0.000000121941 |
| Sechium edule | LG01 | 5 | CH_sed_17 | 10 | 11 | 5.49319e-24 |
| Sechium edule | LG03 | 5 | CH_sed_21 | 9 | 10 | 4.24101e-21 |
| Sechium edule | LG11 | 5 | CH_sed_8 | 13 | 13 | 6.75991e-34 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_2365 | 3 | 4 | 0.000394323 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_29 | 22 | 74 | 1.11406e-42 |
| Sequoiadendron giganteum | chr6 | 5 | CH_sgi_33 | 16 | 17 | 9.35155e-42 |
| Solanum pennellii | Spenn-ch00 | 5 | CH_spe_417 | 3 | 3 | 0.00000457017 |
| Solanum tuberosum | ST4.03ch05 | 5 | CH_stu_526 | 3 | 4 | 0.0000209488 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_53 | 7 | 7 | 1.65899e-19 |
| Trochodendron aralioides | group1 | 5 | CH_tar_9 | 10 | 14 | 3.14607e-27 |
| Theobroma cacao | Chromosome_5 | 5 | CH_tca_41 | 8 | 9 | 1.02492e-20 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_175 | 4 | 4 | 0.000000019456 |
| Acer truncatum | chr2 | 6 | CH_acertr_387 | 3 | 3 | 0.00000213213 |
| Actinidia chinensis | Lachesis_group24 | 6 | CH_ach_184 | 3 | 3 | 0.00000247874 |
| Actinidia chinensis | Lachesis_group20 | 6 | CH_ach_233 | 3 | 5 | 0.0000247729 |
| Aquilegia oxysepala | CHR01 | 6 | CH_aox_20 | 6 | 6 | 6.90034e-17 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 6 | CH_arhy_271 | 5 | 5 | 0.00000000000825981 |
| Amborella trichopoda | AmTr_v1.0_scaffold00103 | 6 | CH_atr_314 | 3 | 4 | 0.0000108262 |
| Amborella trichopoda | AmTr_v1.0_scaffold00022 | 6 | CH_atr_80 | 7 | 52 | 0.00000000000448789 |
| Brassica carinata | ChrC08 | 6 | CH_bca_438 | 4 | 8 | 0.0000000217818 |
| Brassica napus | C06 | 6 | CH_bna_22 | 8 | 10 | 1.49368e-22 |
| Brassica oleracea | C6 | 6 | CH_bol_62 | 5 | 6 | 0.000000000000102829 |
| Camellia sinensis var. sinensis | Chr13 | 6 | CH_camsi_776 | 3 | 4 | 0.00000706335 |
| Capsicum annuum | PGAv.1.6.scaffold1034 | 6 | CH_can_281 | 4 | 6 | 0.0000000603309 |
| Capsicum annuum | PGAv.1.6.scaffold907 | 6 | CH_can_430 | 3 | 3 | 0.00000696127 |
| Capsicum annuum | PGAv.1.6.scaffold649 | 6 | CH_can_431 | 3 | 3 | 0.00000696127 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_40 | 8 | 8 | 2.36641e-23 |
| Carpinus fangiana | Cfa04 | 6 | CH_cfa_35 | 8 | 9 | 1.7736e-21 |
| Citrullus lanatus | CG_Chr02 | 6 | CH_cla_14 | 7 | 7 | 4.46605e-18 |
| Cucumis melo | chr05 | 6 | CH_cme_19 | 10 | 14 | 8.22212e-24 |
| Carica papaya | supercontig_32 | 6 | CH_cpa_226 | 3 | 3 | 0.00000616843 |
| Carica papaya | supercontig_8 | 6 | CH_cpa_246 | 3 | 4 | 0.000024662 |
| Cucumis sativus L. | chr2 | 6 | CH_csa_300 | 3 | 3 | 0.0000342433 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_7 | 12 | 13 | 1.27063e-31 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_438 | 3 | 4 | 0.00000985569 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_37 | 18 | 59 | 8.64678e-35 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_188 | 5 | 9 | 0.0000000000325023 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_23 | 9 | 10 | 1.06704e-26 |
| Malus domestica | Chr07 | 6 | CH_mdo_279 | 5 | 11 | 0.00000000101867 |
| Malus domestica | Chr05 | 6 | CH_mdo_320 | 4 | 4 | 0.00000000448354 |
| Nelumbo nucifera | chr2 | 6 | CH_nnu_130 | 4 | 6 | 0.00000000359472 |
| Nelumbo nucifera | chr7 | 6 | CH_nnu_285 | 3 | 4 | 0.00000398073 |
| Oryza sativa ssp. japonica | chr12 | 6 | CH_osa_529 | 3 | 6 | 0.0000819096 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_311 | 3 | 3 | 0.00000333063 |
| Pisum sativum | chr5LG3 | 6 | CH_psa_496 | 4 | 37 | 0.0000851636 |
| Quercus lobata | 1 | 6 | CH_qlo_247 | 7 | 9 | 1.09229e-16 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_237 | 3 | 3 | 0.00000000310517 |
| Salix brachista | GWHAAZH00000013 | 6 | CH_sbr_334 | 3 | 3 | 0.00000333554 |
| Sechium edule | LG08 | 6 | CH_sed_152 | 4 | 4 | 0.000000121941 |
| Sechium edule | LG01 | 6 | CH_sed_17 | 10 | 11 | 5.49319e-24 |
| Sechium edule | LG03 | 6 | CH_sed_21 | 9 | 10 | 4.24101e-21 |
| Sechium edule | LG11 | 6 | CH_sed_8 | 13 | 13 | 6.75991e-34 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_2365 | 3 | 4 | 0.000394323 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_29 | 22 | 74 | 1.11406e-42 |
| Sequoiadendron giganteum | chr6 | 6 | CH_sgi_33 | 16 | 17 | 9.35155e-42 |
| Solanum pennellii | Spenn-ch00 | 6 | CH_spe_417 | 3 | 3 | 0.00000457017 |
| Solanum tuberosum | ST4.03ch05 | 6 | CH_stu_526 | 3 | 4 | 0.0000209488 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_53 | 7 | 7 | 1.65899e-19 |
| Trochodendron aralioides | group1 | 6 | CH_tar_9 | 10 | 14 | 3.14607e-27 |
| Theobroma cacao | Chromosome_5 | 6 | CH_tca_41 | 8 | 9 | 1.02492e-20 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_175 | 4 | 4 | 0.000000019456 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |