Functional clusters

Information

  • Type InterPro
  • Description Translational (tr)-type GTP-binding domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 5 CH_amhyb_353 3 6 0.000429337
Carica papaya supercontig_53 5 CH_cpa_426 3 5 0.000110496
Chlamydomonas reinhardtii chromosome_6 5 CH_cre_134 3 4 0.000156945
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_785 3 5 0.000521584
Solanum pennellii Spenn-ch06 5 CH_spe_888 3 8 0.000822209
Zea mays 6 5 CH_zma_179 4 5 0.000000147916
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 6 CH_amhyb_353 3 6 0.000429337
Carica papaya supercontig_53 6 CH_cpa_426 3 5 0.000110496
Chlamydomonas reinhardtii chromosome_6 6 CH_cre_134 3 4 0.000156945
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_785 3 5 0.000521584
Solanum pennellii Spenn-ch06 6 CH_spe_888 3 8 0.000822209
Zea mays 6 6 CH_zma_179 4 5 0.000000147916

Available child term results

Ontology identifier Description Number of clusters
IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain 4
IPR044121 Snu114, GTP-binding domain 2
IPR044128 Initiation factor eIF2 gamma, GTP-binding domain 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001