Functional clusters

Information

  • Type InterPro
  • Description Gfo/Idh/MocA-like oxidoreductase, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group27 5 CH_ach_439 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_670 3 4 0.00000244658
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_780 3 6 0.0000122292
Camellia sinensis var. sinensis Chr9 5 CH_camsi_529 3 3 0.000000176627
Corylus avellana 7 5 CH_cav_816 2 2 0.000766695
Ceratophyllum demersum 3 5 CH_cde_302 2 2 0.000236939
Carya illinoinensis Chr15 5 CH_cil_394 3 4 0.000000806718
Citrullus lanatus CG_Chr08 5 CH_cla_115 3 3 0.000000413179
Cucumis sativus L. chr6 5 CH_csa_487 2 2 0.000834759
Daucus carota DCARv2_Chr3 5 CH_dca_739 2 2 0.000956663
Durio zibethinus NW_019167949.1 5 CH_dzi_225 3 4 0.000000451094
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_246 3 3 0.0000000604069
Eucalyptus grandis Chr06 5 CH_egr_1402 2 2 0.000877912
Helianthus annuus HanXRQChr12 5 CH_han_587 3 6 0.00000250805
Hydrangea macrophylla Hma1.2p1_0358F.1 5 CH_hma_122 3 3 0.0000000740453
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_816 2 2 0.000514007
Magnolia biondii Chr05 5 CH_mbi_1016 2 2 0.000291397
Medicago truncatula chr6 5 CH_mtr_225 6 26 0.000000000000279652
Petunia axillaris Peaxi162Scf00226 5 CH_pax_659 3 23 0.000458953
Punica granatum NC_045130.1 5 CH_pgr_606 2 2 0.000750356
Populus trichocarpa Chr05 5 CH_ptr_788 2 2 0.000867002
Rhododendron simsii chr11 5 CH_rsi_456 3 4 0.000000499669
Salvia bowleyana GWHASIU00000005 5 CH_sbo_696 2 2 0.00045498
Sechium edule LG03 5 CH_sed_498 2 2 0.000713419
Sequoiadendron giganteum chr2 5 CH_sgi_643 4 6 0.0000000000780319
Solanum lycopersicum SL4.0ch11 5 CH_sly_935 2 2 0.000880411
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_249 3 4 0.000000518054
Vigna mungo CM024077.1 5 CH_vmu_258 3 5 0.00000751217
Actinidia chinensis Lachesis_group27 6 CH_ach_439 2 2 0.000325928
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_670 3 4 0.00000244658
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_780 3 6 0.0000122292
Camellia sinensis var. sinensis Chr9 6 CH_camsi_529 3 3 0.000000176627
Corylus avellana 7 6 CH_cav_816 2 2 0.000766695
Ceratophyllum demersum 3 6 CH_cde_302 2 2 0.000236939
Carya illinoinensis Chr15 6 CH_cil_394 3 4 0.000000806718
Citrullus lanatus CG_Chr08 6 CH_cla_115 3 3 0.000000413179
Cucumis melo chr03 6 CH_cme_457 2 2 0.000667111
Cucumis sativus L. chr6 6 CH_csa_487 2 2 0.000834759
Daucus carota DCARv2_Chr3 6 CH_dca_739 2 2 0.000956663
Durio zibethinus NW_019167949.1 6 CH_dzi_225 3 4 0.000000451094
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_246 3 3 0.0000000604069
Eucalyptus grandis Chr06 6 CH_egr_1402 2 2 0.000877912
Helianthus annuus HanXRQChr12 6 CH_han_587 3 6 0.00000250805
Hydrangea macrophylla Hma1.2p1_0358F.1 6 CH_hma_122 3 3 0.0000000740453
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_816 2 2 0.000514007
Magnolia biondii Chr05 6 CH_mbi_1016 2 2 0.000291397
Medicago truncatula chr6 6 CH_mtr_225 6 26 0.000000000000279652
Petunia axillaris Peaxi162Scf00226 6 CH_pax_659 3 23 0.000458953
Punica granatum NC_045130.1 6 CH_pgr_606 2 2 0.000750356
Populus trichocarpa Chr05 6 CH_ptr_788 2 2 0.000867002
Rhododendron simsii chr11 6 CH_rsi_456 3 4 0.000000499669
Salvia bowleyana GWHASIU00000005 6 CH_sbo_696 2 2 0.00045498
Sechium edule LG03 6 CH_sed_498 2 2 0.000713419
Sequoiadendron giganteum chr2 6 CH_sgi_643 4 6 0.0000000000780319
Solanum lycopersicum SL4.0ch11 6 CH_sly_935 2 2 0.000880411
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_249 3 4 0.000000518054
Vigna mungo CM024077.1 6 CH_vmu_258 3 5 0.00000751217

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001