Functional clusters
Information
- Type InterPro
- Description PAS domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC06 | 5 | CH_bca_1989 | 3 | 12 | 0.000746311 |
| Brassica carinata | ChrB03 | 5 | CH_bca_911 | 3 | 3 | 0.00000339976 |
| Brassica napus | C07 | 5 | CH_bna_1288 | 3 | 9 | 0.000365667 |
| Brassica napus | A07 | 5 | CH_bna_722 | 3 | 3 | 0.00000435979 |
| Brassica oleracea | C7 | 5 | CH_bol_701 | 3 | 10 | 0.000255351 |
| Chlamydomonas reinhardtii | chromosome_8 | 5 | CH_cre_30 | 5 | 9 | 0.0000000224287 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_253 | 4 | 9 | 0.0000000620882 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_87 | 6 | 10 | 0.0000000000000268235 |
| Nicotiana tabacum | Nitab4.5_0002150 | 5 | CH_nta_142 | 3 | 4 | 0.00000866636 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_99 | 8 | 19 | 1.33723e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_237 | 5 | 6 | 0.000000000000341285 |
| Sequoiadendron giganteum | chr11 | 5 | CH_sgi_1527 | 3 | 6 | 0.0000258981 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1989 | 3 | 12 | 0.000746311 |
| Brassica carinata | ChrB03 | 6 | CH_bca_911 | 3 | 3 | 0.00000339976 |
| Brassica napus | C07 | 6 | CH_bna_1288 | 3 | 9 | 0.000365667 |
| Brassica napus | A07 | 6 | CH_bna_722 | 3 | 3 | 0.00000435979 |
| Brassica oleracea | C7 | 6 | CH_bol_701 | 3 | 10 | 0.000255351 |
| Chlamydomonas reinhardtii | chromosome_8 | 6 | CH_cre_30 | 5 | 9 | 0.0000000224287 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_253 | 4 | 9 | 0.0000000620882 |
| Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_317 | 4 | 7 | 0.0000000902228 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_87 | 6 | 10 | 0.0000000000000268235 |
| Nicotiana tabacum | Nitab4.5_0002150 | 6 | CH_nta_142 | 3 | 4 | 0.00000866636 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_99 | 8 | 19 | 1.33723e-16 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_237 | 5 | 6 | 0.000000000000341285 |
| Sequoiadendron giganteum | chr11 | 6 | CH_sgi_1527 | 3 | 6 | 0.0000258981 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |