Functional clusters

Information

  • Type Gene Ontology
  • Description reactive oxygen species metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 3 CH_aar_131 5 8 0.0000257586
Brassica carinata ChrB02 3 CH_bca_519 4 4 0.0000468141
Marchantia polymorpha scaffold_143 3 CH_mpo_39 6 6 0.000000075057
Selaginella moellendorffii scaffold_84 3 CH_smo_105 7 30 0.0000602468
Trifolium pratense Tp57577_TGAC_v2_LG4 3 CH_tpr_172 4 4 0.0000223567
Tripterygium wilfordii NC_052244.1 3 CH_twi_342 5 14 0.000996402
Aethionema arabicum LG-2 4 CH_aar_131 5 8 0.0000257586
Brassica carinata ChrB02 4 CH_bca_519 4 4 0.0000468141
Marchantia polymorpha scaffold_143 4 CH_mpo_39 6 6 0.000000075057
Selaginella moellendorffii scaffold_84 4 CH_smo_105 7 30 0.0000602468
Trifolium pratense Tp57577_TGAC_v2_LG4 4 CH_tpr_172 4 4 0.0000223567
Tripterygium wilfordii NC_052244.1 4 CH_twi_342 5 14 0.000996402

Available child term results

Ontology identifier Description Number of clusters
GO:0006801 superoxide metabolic process 4
GO:0010310 regulation of hydrogen peroxide metabolic process 2
GO:0010726 positive regulation of hydrogen peroxide metabolic process 22
GO:0010728 regulation of hydrogen peroxide biosynthetic process 2
GO:0010729 positive regulation of hydrogen peroxide biosynthetic process 6
GO:0010730 negative regulation of hydrogen peroxide biosynthetic process 2
GO:0019430 removal of superoxide radicals 2
GO:0032928 regulation of superoxide anion generation 4
GO:0033355 ascorbate glutathione cycle 22
GO:0042743 hydrogen peroxide metabolic process 2
GO:0042744 hydrogen peroxide catabolic process 346
GO:0050665 hydrogen peroxide biosynthetic process 26
GO:1903427 negative regulation of reactive oxygen species biosynthetic process 22
GO:1903428 positive regulation of reactive oxygen species biosynthetic process 2
GO:2000377 regulation of reactive oxygen species metabolic process 2
GO:2000378 negative regulation of reactive oxygen species metabolic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001