Functional clusters
Information
- Type Gene Ontology
- Description reactive oxygen species metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-2 | 3 | CH_aar_131 | 5 | 8 | 0.0000257586 |
Brassica carinata | ChrB02 | 3 | CH_bca_519 | 4 | 4 | 0.0000468141 |
Marchantia polymorpha | scaffold_143 | 3 | CH_mpo_39 | 6 | 6 | 0.000000075057 |
Selaginella moellendorffii | scaffold_84 | 3 | CH_smo_105 | 7 | 30 | 0.0000602468 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 3 | CH_tpr_172 | 4 | 4 | 0.0000223567 |
Tripterygium wilfordii | NC_052244.1 | 3 | CH_twi_342 | 5 | 14 | 0.000996402 |
Aethionema arabicum | LG-2 | 4 | CH_aar_131 | 5 | 8 | 0.0000257586 |
Brassica carinata | ChrB02 | 4 | CH_bca_519 | 4 | 4 | 0.0000468141 |
Marchantia polymorpha | scaffold_143 | 4 | CH_mpo_39 | 6 | 6 | 0.000000075057 |
Selaginella moellendorffii | scaffold_84 | 4 | CH_smo_105 | 7 | 30 | 0.0000602468 |
Trifolium pratense | Tp57577_TGAC_v2_LG4 | 4 | CH_tpr_172 | 4 | 4 | 0.0000223567 |
Tripterygium wilfordii | NC_052244.1 | 4 | CH_twi_342 | 5 | 14 | 0.000996402 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0006801 | superoxide metabolic process | 4 |
GO:0010310 | regulation of hydrogen peroxide metabolic process | 2 |
GO:0010726 | positive regulation of hydrogen peroxide metabolic process | 22 |
GO:0010728 | regulation of hydrogen peroxide biosynthetic process | 2 |
GO:0010729 | positive regulation of hydrogen peroxide biosynthetic process | 6 |
GO:0010730 | negative regulation of hydrogen peroxide biosynthetic process | 2 |
GO:0019430 | removal of superoxide radicals | 2 |
GO:0032928 | regulation of superoxide anion generation | 4 |
GO:0033355 | ascorbate glutathione cycle | 22 |
GO:0042743 | hydrogen peroxide metabolic process | 2 |
GO:0042744 | hydrogen peroxide catabolic process | 346 |
GO:0050665 | hydrogen peroxide biosynthetic process | 26 |
GO:1903427 | negative regulation of reactive oxygen species biosynthetic process | 22 |
GO:1903428 | positive regulation of reactive oxygen species biosynthetic process | 2 |
GO:2000377 | regulation of reactive oxygen species metabolic process | 2 |
GO:2000378 | negative regulation of reactive oxygen species metabolic process | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |