Functional clusters
Information
- Type Gene Ontology
- Description hydrogen peroxide biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_3 | 3 | CH_aly_232 | 4 | 43 | 0.000143511 |
| Brassica carinata | ChrC01 | 3 | CH_bca_814 | 4 | 72 | 0.000444669 |
| Camellia sinensis var. sinensis | Chr15 | 3 | CH_camsi_52 | 8 | 26 | 0.00000000000000218729 |
| Capsicum annuum | PGAv.1.6.scaffold862 | 3 | CH_can_135 | 4 | 6 | 0.0000000181294 |
| Cardamine hirsuta | Chr3 | 3 | CH_chi_239 | 4 | 38 | 0.0000724384 |
| Citrullus lanatus | CG_Chr07 | 3 | CH_cla_68 | 3 | 3 | 0.00000337626 |
| Gossypium hirsutum | A01 | 3 | CH_ghi_503 | 3 | 6 | 0.000227743 |
| Punica granatum | NC_045132.1 | 3 | CH_pgr_36 | 6 | 8 | 0.0000000000000406375 |
| Populus trichocarpa | Chr03 | 3 | CH_ptr_267 | 3 | 3 | 0.0000066652 |
| Quercus lobata | 5 | 3 | CH_qlo_150 | 7 | 16 | 0.00000000000000416996 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_517 | 3 | 6 | 0.0000461642 |
| Simmondsia chinensis | GWHAASQ00000015 | 3 | CH_sci_112 | 3 | 3 | 0.0000105373 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_284 | 5 | 5 | 0.00000000000111249 |
| Arabidopsis lyrata | scaffold_3 | 4 | CH_aly_232 | 4 | 43 | 0.000143511 |
| Brassica carinata | ChrC01 | 4 | CH_bca_814 | 4 | 72 | 0.000444669 |
| Camellia sinensis var. sinensis | Chr15 | 4 | CH_camsi_52 | 8 | 26 | 0.00000000000000218729 |
| Capsicum annuum | PGAv.1.6.scaffold862 | 4 | CH_can_135 | 4 | 6 | 0.0000000181294 |
| Cardamine hirsuta | Chr3 | 4 | CH_chi_239 | 4 | 38 | 0.0000724384 |
| Citrullus lanatus | CG_Chr07 | 4 | CH_cla_68 | 3 | 3 | 0.00000337626 |
| Gossypium hirsutum | A01 | 4 | CH_ghi_503 | 3 | 6 | 0.000227743 |
| Punica granatum | NC_045132.1 | 4 | CH_pgr_36 | 6 | 8 | 0.0000000000000406375 |
| Populus trichocarpa | Chr03 | 4 | CH_ptr_267 | 3 | 3 | 0.0000066652 |
| Quercus lobata | 5 | 4 | CH_qlo_150 | 7 | 16 | 0.00000000000000416996 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_517 | 3 | 6 | 0.0000461642 |
| Simmondsia chinensis | GWHAASQ00000015 | 4 | CH_sci_112 | 3 | 3 | 0.0000105373 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_284 | 5 | 5 | 0.00000000000111249 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010728 | regulation of hydrogen peroxide biosynthetic process | 2 |
| GO:0010729 | positive regulation of hydrogen peroxide biosynthetic process | 6 |
| GO:0010730 | negative regulation of hydrogen peroxide biosynthetic process | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |