Functional clusters
Information
- Type Gene Ontology
- Description detection of stimulus
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr6 | 3 | CH_acertr_94 | 9 | 73 | 0.000000011779 |
Acer truncatum | chr6 | 4 | CH_acertr_94 | 9 | 73 | 0.000000011779 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0005513 | detection of calcium ion | 6 |
GO:0009584 | detection of visible light | 10 |
GO:0009585 | red, far-red light phototransduction | 4 |
GO:0009590 | detection of gravity | 4 |
GO:0009593 | detection of chemical stimulus | 4 |
GO:0009594 | detection of nutrient | 2 |
GO:0016045 | detection of bacterium | 18 |
GO:0016048 | detection of temperature stimulus | 6 |
GO:0032491 | detection of molecule of fungal origin | 32 |
GO:0032497 | detection of lipopolysaccharide | 2 |
GO:0050982 | detection of mechanical stimulus | 42 |
GO:0051776 | detection of redox state | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |