Functional clusters
Information
- Type Gene Ontology
- Description detection of visible light
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 3 | CH_acertr_254 | 3 | 6 | 0.0000178802 |
| Acer truncatum | chr10 | 3 | CH_acertr_97 | 4 | 8 | 0.0000000154398 |
| Amborella trichopoda | AmTr_v1.0_scaffold00047 | 3 | CH_atr_295 | 2 | 2 | 0.000476644 |
| Lonicera japonica | GWHAAZE00000008 | 3 | CH_lonja_599 | 2 | 2 | 0.000898311 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_592 | 3 | 4 | 0.0000000711967 |
| Acer truncatum | chr12 | 4 | CH_acertr_254 | 3 | 6 | 0.0000178802 |
| Acer truncatum | chr10 | 4 | CH_acertr_97 | 4 | 8 | 0.0000000154398 |
| Amborella trichopoda | AmTr_v1.0_scaffold00047 | 4 | CH_atr_295 | 2 | 2 | 0.000476644 |
| Lonicera japonica | GWHAAZE00000008 | 4 | CH_lonja_599 | 2 | 2 | 0.000898311 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_592 | 3 | 4 | 0.0000000711967 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |