Functional clusters
Information
- Type Gene Ontology
- Description glucan metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Cucumis melo | chr07 | 3 | CH_cme_215 | 5 | 12 | 0.000210565 |
Cucumis melo | chr07 | 4 | CH_cme_215 | 5 | 12 | 0.000210565 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0005983 | starch catabolic process | 4 |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | 38 |
GO:0009250 | glucan biosynthetic process | 4 |
GO:0009251 | glucan catabolic process | 8 |
GO:0009969 | xyloglucan biosynthetic process | 4 |
GO:0010411 | xyloglucan metabolic process | 10 |
GO:0010581 | regulation of starch biosynthetic process | 4 |
GO:0019252 | starch biosynthetic process | 2 |
GO:0030244 | cellulose biosynthetic process | 10 |
GO:0030245 | cellulose catabolic process | 8 |
GO:0032953 | regulation of (1->3)-beta-D-glucan biosynthetic process | 2 |
GO:0052324 | plant-type cell wall cellulose biosynthetic process | 12 |
GO:2000905 | negative regulation of starch metabolic process | 6 |
GO:2001006 | regulation of cellulose biosynthetic process | 4 |
GO:2001007 | negative regulation of cellulose biosynthetic process | 34 |
GO:2001011 | positive regulation of plant-type cell wall cellulose biosynthetic process | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |