Functional clusters

Information

  • Type Gene Ontology
  • Description cellulose biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 3 CH_amhyb_56 4 4 0.000000348197
Beta vulgaris Chr3_EL10_PGA_scaffold7 3 CH_bvu_105 4 5 0.000000861066
Camellia sinensis var. sinensis Chr14 3 CH_camsi_709 5 41 0.000308955
Sequoiadendron giganteum chr8 3 CH_sgi_810 4 6 0.00000533814
Trifolium pratense Tp57577_TGAC_v2_LG1 3 CH_tpr_157 4 7 0.0000113329
Amaranthus hybridus AmaHy_arrow1_Scaffold_4 4 CH_amhyb_56 4 4 0.000000348197
Beta vulgaris Chr3_EL10_PGA_scaffold7 4 CH_bvu_105 4 5 0.000000861066
Camellia sinensis var. sinensis Chr14 4 CH_camsi_709 5 41 0.000308955
Sequoiadendron giganteum chr8 4 CH_sgi_810 4 6 0.00000533814
Trifolium pratense Tp57577_TGAC_v2_LG1 4 CH_tpr_157 4 7 0.0000113329

Available child term results

Ontology identifier Description Number of clusters
GO:0052324 plant-type cell wall cellulose biosynthetic process 12
GO:2001006 regulation of cellulose biosynthetic process 4
GO:2001007 negative regulation of cellulose biosynthetic process 34
GO:2001011 positive regulation of plant-type cell wall cellulose biosynthetic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001