Functional clusters

Information

  • Type Gene Ontology
  • Description cell wall modification

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corylus avellana 3 3 CH_cav_291 4 7 0.000143115
Magnolia biondii Chr04 3 CH_mbi_181 6 15 0.0000000509417
Nelumbo nucifera chr2 3 CH_nnu_244 4 7 0.00023575
Rhododendron simsii chr03 3 CH_rsi_276 4 4 0.000003854
Salvia bowleyana GWHASIU00000008 3 CH_sbo_87 9 29 0.00000000000409218
Selenicereus undatus Scaffold_33679 3 CH_sun_116 6 51 0.000107183
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_34 7 7 0.00000000000100526
Corylus avellana 3 4 CH_cav_291 4 7 0.000143115
Magnolia biondii Chr04 4 CH_mbi_181 6 15 0.0000000509417
Nelumbo nucifera chr2 4 CH_nnu_244 4 7 0.00023575
Rhododendron simsii chr03 4 CH_rsi_276 4 4 0.000003854
Salvia bowleyana GWHASIU00000008 4 CH_sbo_87 9 29 0.00000000000409218
Selenicereus undatus Scaffold_33679 4 CH_sun_116 6 51 0.000107183
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_34 7 7 0.00000000000100526

Available child term results

Ontology identifier Description Number of clusters
GO:0009827 plant-type cell wall modification 4
GO:0009828 plant-type cell wall loosening 6
GO:0009829 cell wall modification involved in fruit ripening 2
GO:0009830 cell wall modification involved in abscission 10
GO:0009831 plant-type cell wall modification involved in multidimensional cell growth 4
GO:0042547 cell wall modification involved in multidimensional cell growth 42
GO:0052386 cell wall thickening 2
GO:0052543 callose deposition in cell wall 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001