Functional clusters
Information
- Type Gene Ontology
- Description cell wall modification involved in multidimensional cell growth
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 3 | CH_arhy_477 | 3 | 8 | 0.0000728856 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 3 | CH_arhy_596 | 3 | 13 | 0.000371875 |
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_444 | 3 | 5 | 0.0000143444 |
| Citrus clementina | scaffold_4 | 3 | CH_ccl_202 | 4 | 15 | 0.000000743812 |
| Carica papaya | supercontig_69 | 3 | CH_cpa_16 | 5 | 6 | 0.00000000000472997 |
| Eucalyptus grandis | Chr02 | 3 | CH_egr_32 | 11 | 17 | 1.71944e-29 |
| Glycine max | Gm18 | 3 | CH_gma_265 | 3 | 5 | 0.0000209297 |
| Lotus japonicus | chr4 | 3 | CH_lja_293 | 4 | 60 | 0.000260908 |
| Lonicera japonica | GWHAAZE00000006 | 3 | CH_lonja_377 | 3 | 8 | 0.0000496583 |
| Manihot esculenta | Chromosome12 | 3 | CH_mes_435 | 3 | 14 | 0.000923243 |
| Medicago truncatula | chr8 | 3 | CH_mtr_350 | 3 | 3 | 0.000000921714 |
| Olea europaea | scaffold1119 | 3 | CH_oeu_348 | 3 | 15 | 0.000705777 |
| Prunus persica | Pp01 | 3 | CH_ppe_439 | 3 | 15 | 0.000454484 |
| Quercus lobata | 11 | 3 | CH_qlo_736 | 3 | 5 | 0.0000531391 |
| Quercus lobata | 3 | 3 | CH_qlo_77 | 10 | 49 | 5.3003e-20 |
| Sequoiadendron giganteum | chr9 | 3 | CH_sgi_526 | 4 | 5 | 0.0000000153508 |
| Solanum lycopersicum | SL4.0ch05 | 3 | CH_sly_95 | 5 | 15 | 0.000000000211312 |
| Solanum pennellii | Spenn-ch05 | 3 | CH_spe_135 | 4 | 14 | 0.0000000870817 |
| Solanum tuberosum | ST4.03ch05 | 3 | CH_stu_63 | 6 | 10 | 0.00000000000000501172 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 3 | CH_tpr_137 | 3 | 4 | 0.00000412485 |
| Utricularia gibba | unitig_22 | 3 | CH_ugi_11 | 6 | 9 | 0.00000000000013033 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 4 | CH_arhy_477 | 3 | 8 | 0.0000728856 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 4 | CH_arhy_596 | 3 | 13 | 0.000371875 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_444 | 3 | 5 | 0.0000143444 |
| Citrus clementina | scaffold_4 | 4 | CH_ccl_202 | 4 | 15 | 0.000000743812 |
| Carica papaya | supercontig_69 | 4 | CH_cpa_16 | 5 | 6 | 0.00000000000472997 |
| Eucalyptus grandis | Chr02 | 4 | CH_egr_32 | 11 | 17 | 1.71944e-29 |
| Glycine max | Gm18 | 4 | CH_gma_265 | 3 | 5 | 0.0000209297 |
| Lotus japonicus | chr4 | 4 | CH_lja_293 | 4 | 60 | 0.000260908 |
| Lonicera japonica | GWHAAZE00000006 | 4 | CH_lonja_377 | 3 | 8 | 0.0000496583 |
| Manihot esculenta | Chromosome12 | 4 | CH_mes_435 | 3 | 14 | 0.000923243 |
| Medicago truncatula | chr8 | 4 | CH_mtr_350 | 3 | 3 | 0.000000921714 |
| Olea europaea | scaffold1119 | 4 | CH_oeu_348 | 3 | 15 | 0.000705777 |
| Prunus persica | Pp01 | 4 | CH_ppe_439 | 3 | 15 | 0.000454484 |
| Quercus lobata | 11 | 4 | CH_qlo_736 | 3 | 5 | 0.0000531391 |
| Quercus lobata | 3 | 4 | CH_qlo_77 | 10 | 49 | 5.3003e-20 |
| Sequoiadendron giganteum | chr9 | 4 | CH_sgi_526 | 4 | 5 | 0.0000000153508 |
| Solanum lycopersicum | SL4.0ch05 | 4 | CH_sly_95 | 5 | 15 | 0.000000000211312 |
| Solanum pennellii | Spenn-ch05 | 4 | CH_spe_135 | 4 | 14 | 0.0000000870817 |
| Solanum tuberosum | ST4.03ch05 | 4 | CH_stu_63 | 6 | 10 | 0.00000000000000501172 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 4 | CH_tpr_137 | 3 | 4 | 0.00000412485 |
| Utricularia gibba | unitig_22 | 4 | CH_ugi_11 | 6 | 9 | 0.00000000000013033 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009831 | plant-type cell wall modification involved in multidimensional cell growth | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |