Functional clusters
Information
- Type Gene Ontology
- Description ribosomal large subunit biogenesis
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 3 | CH_amhyb_50 | 4 | 9 | 0.000000111436 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4082 | 3 | CH_cqu_318 | 4 | 16 | 0.0000339574 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 4 | CH_amhyb_50 | 4 | 9 | 0.000000111436 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4082 | 4 | CH_cqu_318 | 4 | 16 | 0.0000339574 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0000027 | ribosomal large subunit assembly | 6 |
| GO:0000463 | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8 |
| GO:0000488 | maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |