Functional clusters

Information

  • Type Gene Ontology
  • Description cellular response to unfolded protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_22153_HRSCAF_22259 3 CH_ama_31 3 4 0.00000249748
Brassica carinata ChrC01 3 CH_bca_954 2 2 0.000769551
Brassica carinata ChrC03 3 CH_bca_955 2 2 0.000769551
Erigeron canadensis Conyza_canadensis_scaffold:6 3 CH_eca_482 2 2 0.000942317
Helianthus annuus HanXRQChr10 3 CH_han_265 4 18 0.000000174508
Magnolia biondii Chr11 3 CH_mbi_310 3 6 0.00000396128
Medicago truncatula chr7 3 CH_mtr_203 4 11 0.0000000024022
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_324 3 4 0.000000533944
Theobroma cacao Chromosome_7 3 CH_tca_177 3 4 0.000000643614
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_91 4 10 0.0000000176782
Avicennia marina ScioBoG_22153_HRSCAF_22259 4 CH_ama_31 3 4 0.00000249748
Brassica carinata ChrC01 4 CH_bca_954 2 2 0.000769551
Brassica carinata ChrC03 4 CH_bca_955 2 2 0.000769551
Erigeron canadensis Conyza_canadensis_scaffold:6 4 CH_eca_482 2 2 0.000942317
Helianthus annuus HanXRQChr10 4 CH_han_265 4 18 0.000000174508
Magnolia biondii Chr11 4 CH_mbi_310 3 6 0.00000396128
Medicago truncatula chr7 4 CH_mtr_203 4 11 0.0000000024022
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_324 3 4 0.000000533944
Theobroma cacao Chromosome_7 4 CH_tca_177 3 4 0.000000643614
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_91 4 10 0.0000000176782

Available child term results

Ontology identifier Description Number of clusters
GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response 6
GO:0030968 endoplasmic reticulum unfolded protein response 70
GO:1900103 positive regulation of endoplasmic reticulum unfolded protein response 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001