Functional clusters
Information
- Type Gene Ontology
- Description negative regulation of defense response
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 3 | CH_arhy_197 | 6 | 8 | 0.000000000479537 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 3 | CH_arhy_367 | 4 | 4 | 0.00000276855 |
| Carya illinoinensis | Chr01 | 3 | CH_cil_273 | 4 | 4 | 0.00000648629 |
| Glycine max | Gm03 | 3 | CH_gma_50 | 7 | 8 | 0.000000000000957432 |
| Glycine max | Gm07 | 3 | CH_gma_59 | 6 | 6 | 0.0000000000405259 |
| Lupinus albus | Lalb_Chr10 | 3 | CH_lal_205 | 4 | 5 | 0.0000177698 |
| Magnolia biondii | Chr12 | 3 | CH_mbi_571 | 4 | 12 | 0.000409837 |
| Malus domestica | Chr07 | 3 | CH_mdo_297 | 4 | 4 | 0.0000023662 |
| Medicago truncatula | chr8 | 3 | CH_mtr_25 | 11 | 13 | 1.4339e-23 |
| Rhododendron simsii | chr07 | 3 | CH_rsi_304 | 4 | 5 | 0.0000112378 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 3 | CH_tpr_126 | 4 | 4 | 0.00000276361 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.02 | 4 | CH_arhy_197 | 6 | 8 | 0.000000000479537 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 4 | CH_arhy_367 | 4 | 4 | 0.00000276855 |
| Carya illinoinensis | Chr01 | 4 | CH_cil_273 | 4 | 4 | 0.00000648629 |
| Glycine max | Gm03 | 4 | CH_gma_50 | 7 | 8 | 0.000000000000957432 |
| Glycine max | Gm07 | 4 | CH_gma_59 | 6 | 6 | 0.0000000000405259 |
| Lupinus albus | Lalb_Chr10 | 4 | CH_lal_205 | 4 | 5 | 0.0000177698 |
| Magnolia biondii | Chr12 | 4 | CH_mbi_571 | 4 | 12 | 0.000409837 |
| Malus domestica | Chr07 | 4 | CH_mdo_297 | 4 | 4 | 0.0000023662 |
| Medicago truncatula | chr8 | 4 | CH_mtr_25 | 11 | 13 | 1.4339e-23 |
| Rhododendron simsii | chr07 | 4 | CH_rsi_304 | 4 | 5 | 0.0000112378 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 4 | CH_tpr_126 | 4 | 4 | 0.00000276361 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0034051 | negative regulation of plant-type hypersensitive response | 2 |
| GO:0051245 | negative regulation of cellular defense response | 8 |
| GO:1900366 | negative regulation of defense response to insect | 2 |
| GO:1900425 | negative regulation of defense response to bacterium | 36 |
| GO:1902289 | negative regulation of defense response to oomycetes | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |