Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of steroid metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 3 CH_acertr_505 2 2 0.00070497
Citrus clementina scaffold_8 3 CH_ccl_161 4 19 0.0000000961369
Carica papaya supercontig_195 3 CH_cpa_168 2 2 0.0000950661
Daucus carota DCARv2_Chr3 3 CH_dca_171 3 4 0.00000402613
Daucus carota DCARv2_Chr3 3 CH_dca_28 6 12 0.0000000000000101283
Helianthus annuus HanXRQChr15 3 CH_han_680 2 2 0.000579643
Lupinus albus Lalb_Chr24 3 CH_lal_376 2 2 0.000524824
Lotus japonicus chr3 3 CH_lja_323 2 2 0.000429046
Lonicera japonica GWHAAZE00000002 3 CH_lonja_81 6 16 0.00000000000000388436
Lactuca sativa Lsat_1_v8_lg_1 3 CH_lsa_104 4 4 0.000000000201682
Lactuca sativa Lsat_1_v8_lg_9 3 CH_lsa_128 5 24 0.00000000175674
Magnolia biondii Chr01 3 CH_mbi_486 2 2 0.000145698
Quercus lobata 8 3 CH_qlo_974 2 2 0.000516289
Rhododendron simsii chr01 3 CH_rsi_127 4 6 0.000000000181373
Theobroma cacao Chromosome_9 3 CH_tca_330 2 2 0.000219716
Acer truncatum chr3 4 CH_acertr_505 2 2 0.00070497
Citrus clementina scaffold_8 4 CH_ccl_161 4 19 0.0000000961369
Carica papaya supercontig_195 4 CH_cpa_168 2 2 0.0000950661
Daucus carota DCARv2_Chr3 4 CH_dca_171 3 4 0.00000402613
Daucus carota DCARv2_Chr3 4 CH_dca_28 6 12 0.0000000000000101283
Helianthus annuus HanXRQChr15 4 CH_han_680 2 2 0.000579643
Lupinus albus Lalb_Chr24 4 CH_lal_376 2 2 0.000524824
Lotus japonicus chr3 4 CH_lja_323 2 2 0.000429046
Lonicera japonica GWHAAZE00000002 4 CH_lonja_81 6 16 0.00000000000000388436
Lactuca sativa Lsat_1_v8_lg_1 4 CH_lsa_104 4 4 0.000000000201682
Lactuca sativa Lsat_1_v8_lg_9 4 CH_lsa_128 5 24 0.00000000175674
Magnolia biondii Chr01 4 CH_mbi_486 2 2 0.000145698
Quercus lobata 8 4 CH_qlo_974 2 2 0.000516289
Rhododendron simsii chr01 4 CH_rsi_127 4 6 0.000000000181373
Theobroma cacao Chromosome_9 4 CH_tca_330 2 2 0.000219716

Available child term results

Ontology identifier Description Number of clusters
GO:0010422 regulation of brassinosteroid biosynthetic process 44
GO:0106118 regulation of sterol biosynthetic process 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001