Functional clusters

Information

  • Type Gene Ontology
  • Description covalent chromatin modification

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Sapria himalayana scaffold26_7557582 3 CH_shi_36 6 8 0.00000000119818
Sapria himalayana scaffold26_7557582 4 CH_shi_36 6 8 0.00000000119818

Available child term results

Ontology identifier Description Number of clusters
GO:0006346 DNA methylation-dependent heterochromatin assembly 6
GO:0010390 histone monoubiquitination 20
GO:0016573 histone acetylation 4
GO:0016575 histone deacetylation 8
GO:0033184 positive regulation of histone ubiquitination 4
GO:0033523 histone H2B ubiquitination 2
GO:0034720 histone H3-K4 demethylation 8
GO:0034968 histone lysine methylation 2
GO:0034970 histone H3-R2 methylation 2
GO:0035065 regulation of histone acetylation 6
GO:0035407 histone H3-T11 phosphorylation 6
GO:0035616 histone H2B conserved C-terminal lysine deubiquitination 2
GO:0036123 histone H3-K9 dimethylation 2
GO:0043967 histone H4 acetylation 6
GO:0043968 histone H2A acetylation 10
GO:0043970 histone H3-K9 acetylation 4
GO:0043971 histone H3-K18 acetylation 56
GO:0043981 histone H4-K5 acetylation 2
GO:0043984 histone H4-K16 acetylation 2
GO:0043985 histone H4-R3 methylation 2
GO:0043987 histone H3-S10 phosphorylation 2
GO:0051571 positive regulation of histone H3-K4 methylation 8
GO:0051572 negative regulation of histone H3-K4 methylation 2
GO:0051573 negative regulation of histone H3-K9 methylation 2
GO:0061866 negative regulation of histone H3-S10 phosphorylation 2
GO:0070544 histone H3-K36 demethylation 4
GO:0070932 histone H3 deacetylation 2
GO:0090241 negative regulation of histone H4 acetylation 2
GO:0090309 positive regulation of DNA methylation-dependent heterochromatin assembly 2
GO:0098532 histone H3-K27 trimethylation 4
GO:1900109 regulation of histone H3-K9 dimethylation 4
GO:1902464 regulation of histone H3-K27 trimethylation 8
GO:1902466 positive regulation of histone H3-K27 trimethylation 2
GO:1905435 regulation of histone H3-K4 trimethylation 4
GO:1990164 histone H2A phosphorylation 8
GO:2000617 positive regulation of histone H3-K9 acetylation 2
GO:2001253 regulation of histone H3-K36 trimethylation 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001