Functional clusters

Information

  • Type Gene Ontology
  • Description histone H3-K18 acetylation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 3 CH_acertr_494 2 2 0.00070497
Beta vulgaris Chr4_EL10_PGA_scaffold1 3 CH_bvu_207 2 2 0.000248375
Camellia sinensis var. sinensis Chr6 3 CH_camsi_596 2 3 0.000137564
Corylus avellana 2 3 CH_cav_393 2 3 0.000689981
Coffea canephora chr2 3 CH_ccan_349 2 9 0.000459951
Citrullus lanatus CG_Chr02 3 CH_cla_129 2 2 0.000266134
Cucumis melo chr05 3 CH_cme_259 2 3 0.000600367
Carica papaya supercontig_48 3 CH_cpa_218 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_2088 3 CH_cqu_512 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3820 3 CH_cqu_513 2 2 0.000710732
Cucumis sativus L. chr2 3 CH_csa_219 2 2 0.000250428
Gossypium hirsutum D08 3 CH_ghi_614 2 2 0.000560733
Gossypium raimondii Chr04 3 CH_gra_295 2 2 0.000321664
Manihot esculenta Chromosome09 3 CH_mes_330 2 2 0.000183189
Olea europaea chr3 3 CH_oeu_304 2 3 0.000480389
Petunia axillaris Peaxi162Scf00037 3 CH_pax_319 2 3 0.000633164
Populus trichocarpa Chr13 3 CH_ptr_168 3 3 0.0000000200457
Quercus lobata 3 3 CH_qlo_463 4 44 0.00000027973
Rhododendron simsii chr05 3 CH_rsi_444 2 2 0.000387184
Salix brachista GWHAAZH00000013 3 CH_sbr_278 2 2 0.000189042
Sechium edule LG08 3 CH_sed_236 2 2 0.000428052
Solanum lycopersicum SL4.0ch01 3 CH_sly_526 2 3 0.000528221
Solanum pennellii Spenn-ch01 3 CH_spe_403 2 3 0.000400297
Solanum tuberosum ST4.03ch01 3 CH_stu_556 2 3 0.000461188
Selenicereus undatus Scaffold_33676 3 CH_sun_138 2 2 0.000217992
Theobroma cacao Chromosome_5 3 CH_tca_28 5 5 0.000000000000001295
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_367 2 3 0.00083625
Vitis vinifera chr14 3 CH_vvi_371 2 2 0.000456378
Acer truncatum chr2 4 CH_acertr_494 2 2 0.00070497
Beta vulgaris Chr4_EL10_PGA_scaffold1 4 CH_bvu_207 2 2 0.000248375
Camellia sinensis var. sinensis Chr6 4 CH_camsi_596 2 3 0.000137564
Corylus avellana 2 4 CH_cav_393 2 3 0.000689981
Coffea canephora chr2 4 CH_ccan_349 2 9 0.000459951
Citrullus lanatus CG_Chr02 4 CH_cla_129 2 2 0.000266134
Cucumis melo chr05 4 CH_cme_259 2 3 0.000600367
Carica papaya supercontig_48 4 CH_cpa_218 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_2088 4 CH_cqu_512 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3820 4 CH_cqu_513 2 2 0.000710732
Cucumis sativus L. chr2 4 CH_csa_219 2 2 0.000250428
Gossypium hirsutum D08 4 CH_ghi_614 2 2 0.000560733
Gossypium raimondii Chr04 4 CH_gra_295 2 2 0.000321664
Manihot esculenta Chromosome09 4 CH_mes_330 2 2 0.000183189
Olea europaea chr3 4 CH_oeu_304 2 3 0.000480389
Petunia axillaris Peaxi162Scf00037 4 CH_pax_319 2 3 0.000633164
Populus trichocarpa Chr13 4 CH_ptr_168 3 3 0.0000000200457
Quercus lobata 3 4 CH_qlo_463 4 44 0.00000027973
Rhododendron simsii chr05 4 CH_rsi_444 2 2 0.000387184
Salix brachista GWHAAZH00000013 4 CH_sbr_278 2 2 0.000189042
Sechium edule LG08 4 CH_sed_236 2 2 0.000428052
Solanum lycopersicum SL4.0ch01 4 CH_sly_526 2 3 0.000528221
Solanum pennellii Spenn-ch01 4 CH_spe_403 2 3 0.000400297
Solanum tuberosum ST4.03ch01 4 CH_stu_556 2 3 0.000461188
Selenicereus undatus Scaffold_33676 4 CH_sun_138 2 2 0.000217992
Theobroma cacao Chromosome_5 4 CH_tca_28 5 5 0.000000000000001295
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_367 2 3 0.00083625
Vitis vinifera chr14 4 CH_vvi_371 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001