Functional clusters

Information

  • Type Gene Ontology
  • Description pollen-pistil interaction

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr11 3 CH_ccan_112 4 79 0.00000102752
Magnolia biondii Chr18 3 CH_mbi_653 4 61 0.000852504
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_395 3 3 0.0000042219
Coffea canephora chr11 4 CH_ccan_112 4 79 0.00000102752
Magnolia biondii Chr18 4 CH_mbi_653 4 61 0.000852504
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_395 3 3 0.0000042219

Available child term results

Ontology identifier Description Number of clusters
GO:0009859 pollen hydration 12
GO:0048544 recognition of pollen 748
GO:0060320 rejection of self pollen 48
GO:0060321 acceptance of pollen 2
GO:0140301 pollen-stigma interaction 6
GO:1990109 rejection of pollen from other species 38

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001