Functional clusters
Information
- Type Gene Ontology
- Description rejection of pollen from other species
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 3 | CH_arhy_445 | 2 | 2 | 0.0000299383 |
| Cannabis sativa | NC_044371.1 | 3 | CH_cansat_99 | 3 | 3 | 0.0000000258716 |
| Carya illinoinensis | Chr03 | 3 | CH_cil_238 | 3 | 12 | 0.0000012675 |
| Durio zibethinus | NW_019168037.1 | 3 | CH_dzi_207 | 2 | 2 | 0.0000463489 |
| Eucalyptus grandis | Chr03 | 3 | CH_egr_74 | 10 | 59 | 2.36118e-22 |
| Erythranthe guttata | scaffold_1 | 3 | CH_egut_384 | 2 | 2 | 0.000436888 |
| Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_239 | 3 | 8 | 0.00000030123 |
| Malus domestica | Chr12 | 3 | CH_mdo_222 | 3 | 9 | 0.000000181173 |
| Manihot esculenta | Chromosome07 | 3 | CH_mes_278 | 2 | 2 | 0.0000610631 |
| Olea europaea | chr8 | 3 | CH_oeu_180 | 2 | 2 | 0.0000533789 |
| Punica granatum | NC_045128.1 | 3 | CH_pgr_26 | 5 | 6 | 0.0000000000000014268 |
| Papaver somniferum | NC_039360.1 | 3 | CH_pso_408 | 2 | 2 | 0.0000225294 |
| Quercus lobata | 5 | 3 | CH_qlo_274 | 4 | 9 | 0.00000000026006 |
| Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_136 | 3 | 3 | 0.00000000310517 |
| Sechium edule | LG06 | 3 | CH_sed_181 | 2 | 2 | 0.0000713419 |
| Theobroma cacao | Chromosome_9 | 3 | CH_tca_318 | 2 | 3 | 0.000219708 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 3 | CH_tpr_71 | 3 | 4 | 0.0000000343805 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_252 | 2 | 2 | 0.0000929238 |
| Vitis vinifera | chr11 | 3 | CH_vvi_370 | 2 | 4 | 0.000456343 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 4 | CH_arhy_445 | 2 | 2 | 0.0000299383 |
| Cannabis sativa | NC_044371.1 | 4 | CH_cansat_99 | 3 | 3 | 0.0000000258716 |
| Carya illinoinensis | Chr03 | 4 | CH_cil_238 | 3 | 12 | 0.0000012675 |
| Durio zibethinus | NW_019168037.1 | 4 | CH_dzi_207 | 2 | 2 | 0.0000463489 |
| Eucalyptus grandis | Chr03 | 4 | CH_egr_74 | 10 | 59 | 2.36118e-22 |
| Erythranthe guttata | scaffold_1 | 4 | CH_egut_384 | 2 | 2 | 0.000436888 |
| Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_239 | 3 | 8 | 0.00000030123 |
| Malus domestica | Chr12 | 4 | CH_mdo_222 | 3 | 9 | 0.000000181173 |
| Manihot esculenta | Chromosome07 | 4 | CH_mes_278 | 2 | 2 | 0.0000610631 |
| Olea europaea | chr8 | 4 | CH_oeu_180 | 2 | 2 | 0.0000533789 |
| Punica granatum | NC_045128.1 | 4 | CH_pgr_26 | 5 | 6 | 0.0000000000000014268 |
| Papaver somniferum | NC_039360.1 | 4 | CH_pso_408 | 2 | 2 | 0.0000225294 |
| Quercus lobata | 5 | 4 | CH_qlo_274 | 4 | 9 | 0.00000000026006 |
| Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_136 | 3 | 3 | 0.00000000310517 |
| Sechium edule | LG06 | 4 | CH_sed_181 | 2 | 2 | 0.0000713419 |
| Theobroma cacao | Chromosome_9 | 4 | CH_tca_318 | 2 | 3 | 0.000219708 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 4 | CH_tpr_71 | 3 | 4 | 0.0000000343805 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_252 | 2 | 2 | 0.0000929238 |
| Vitis vinifera | chr11 | 4 | CH_vvi_370 | 2 | 4 | 0.000456343 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |