Functional clusters

Information

  • Type Gene Ontology
  • Description auxin metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044379.1 3 CH_cansat_320 3 3 0.000473126
Carya illinoinensis Chr10 3 CH_cil_368 4 7 0.000105482
Hydrangea macrophylla Hma1.2p1_0245F.1 3 CH_hma_223 3 3 0.000228448
Prunus persica Pp07 3 CH_ppe_254 4 5 0.00000603821
Rosa chinensis RcHm_v2.0_Chr3 3 CH_rch_304 4 4 0.000000332457
Theobroma cacao Chromosome_5 3 CH_tca_369 4 11 0.000441048
Vanilla planifolia CM028150.1 3 CH_vpl_370 6 67 0.000869721
Cannabis sativa NC_044379.1 4 CH_cansat_320 3 3 0.000473126
Carya illinoinensis Chr10 4 CH_cil_368 4 7 0.000105482
Hydrangea macrophylla Hma1.2p1_0245F.1 4 CH_hma_223 3 3 0.000228448
Prunus persica Pp07 4 CH_ppe_254 4 5 0.00000603821
Rosa chinensis RcHm_v2.0_Chr3 4 CH_rch_304 4 4 0.000000332457
Theobroma cacao Chromosome_5 4 CH_tca_369 4 11 0.000441048
Vanilla planifolia CM028150.1 4 CH_vpl_370 6 67 0.000869721

Available child term results

Ontology identifier Description Number of clusters
GO:0009684 indoleacetic acid biosynthetic process 2
GO:0009851 auxin biosynthetic process 2
GO:0009852 auxin catabolic process 24
GO:0010601 positive regulation of auxin biosynthetic process 2
GO:0033473 indoleacetic acid conjugate metabolic process 2
GO:0080024 indolebutyric acid metabolic process 2
GO:0090354 regulation of auxin metabolic process 6
GO:0090356 negative regulation of auxin metabolic process 14
GO:1901997 negative regulation of indoleacetic acid biosynthetic process via tryptophan 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001