Functional clusters
Information
- Type Gene Ontology
- Description auxin catabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_417 | 2 | 3 | 0.0000859463 |
| Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_259 | 3 | 5 | 0.000000126152 |
| Carya illinoinensis | Chr13 | 3 | CH_cil_345 | 2 | 2 | 0.0000619828 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 3 | CH_cqu_329 | 2 | 2 | 0.0000473821 |
| Daucus carota | DCARv2_Chr2 | 3 | CH_dca_350 | 2 | 2 | 0.000382665 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_32 | 4 | 5 | 0.00000000000135533 |
| Helianthus annuus | HanXRQChr11 | 3 | CH_han_591 | 2 | 2 | 0.000231857 |
| Lotus japonicus | chr2 | 3 | CH_lja_94 | 3 | 5 | 0.0000000766976 |
| Magnolia biondii | Chr04 | 3 | CH_mbi_75 | 4 | 7 | 0.0000000000120279 |
| Phaseolus vulgaris | Chr02 | 3 | CH_pvu_251 | 2 | 2 | 0.0000734727 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_129 | 3 | 3 | 0.00000000516764 |
| Tripterygium wilfordii | NC_052235.1 | 3 | CH_twi_285 | 2 | 2 | 0.000334728 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_417 | 2 | 3 | 0.0000859463 |
| Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_259 | 3 | 5 | 0.000000126152 |
| Carya illinoinensis | Chr13 | 4 | CH_cil_345 | 2 | 2 | 0.0000619828 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 4 | CH_cqu_329 | 2 | 2 | 0.0000473821 |
| Daucus carota | DCARv2_Chr2 | 4 | CH_dca_350 | 2 | 2 | 0.000382665 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_32 | 4 | 5 | 0.00000000000135533 |
| Helianthus annuus | HanXRQChr11 | 4 | CH_han_591 | 2 | 2 | 0.000231857 |
| Lotus japonicus | chr2 | 4 | CH_lja_94 | 3 | 5 | 0.0000000766976 |
| Magnolia biondii | Chr04 | 4 | CH_mbi_75 | 4 | 7 | 0.0000000000120279 |
| Phaseolus vulgaris | Chr02 | 4 | CH_pvu_251 | 2 | 2 | 0.0000734727 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_129 | 3 | 3 | 0.00000000516764 |
| Tripterygium wilfordii | NC_052235.1 | 4 | CH_twi_285 | 2 | 2 | 0.000334728 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |