Functional clusters
Information
- Type Gene Ontology
- Description megagametogenesis
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_490 | 4 | 16 | 0.000232576 |
| Corchorus olitorius | AWUE01015448.1 | 3 | CH_col_66 | 3 | 3 | 0.00022669 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_34 | 10 | 24 | 0.0000000000000140868 |
| Punica granatum | NC_045131.1 | 3 | CH_pgr_49 | 8 | 13 | 0.000000000000842182 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_490 | 4 | 16 | 0.000232576 |
| Corchorus olitorius | AWUE01015448.1 | 4 | CH_col_66 | 3 | 3 | 0.00022669 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_34 | 10 | 24 | 0.0000000000000140868 |
| Punica granatum | NC_045131.1 | 4 | CH_pgr_49 | 8 | 13 | 0.000000000000842182 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009557 | antipodal cell differentiation | 2 |
| GO:0009559 | embryo sac central cell differentiation | 2 |
| GO:0010197 | polar nucleus fusion | 28 |
| GO:0045691 | regulation of embryo sac central cell differentiation | 4 |
| GO:0045694 | regulation of embryo sac egg cell differentiation | 2 |
| GO:0048314 | embryo sac morphogenesis | 10 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |