Functional clusters
Information
- Type Gene Ontology
- Description polar nucleus fusion
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-11 | 3 | CH_aar_142 | 3 | 3 | 0.0000619288 |
| Carya illinoinensis | Chr02 | 3 | CH_cil_385 | 4 | 17 | 0.000170089 |
| Helianthus annuus | HanXRQChr17 | 3 | CH_han_65 | 9 | 35 | 0.0000000000000114945 |
| Lotus japonicus | chr2 | 3 | CH_lja_70 | 6 | 16 | 0.0000000046491 |
| Punica granatum | NC_045127.1 | 3 | CH_pgr_92 | 6 | 16 | 0.000000000689212 |
| Populus trichocarpa | Chr13 | 3 | CH_ptr_195 | 4 | 4 | 0.000000112731 |
| Quercus lobata | 5 | 3 | CH_qlo_915 | 3 | 4 | 0.00033275 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_178 | 5 | 8 | 0.00000000069683 |
| Rhododendron simsii | chr04 | 3 | CH_rsi_299 | 4 | 9 | 0.0000102369 |
| Salix brachista | GWHAAZH00000013 | 3 | CH_sbr_118 | 4 | 4 | 0.0000000554137 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1078 | 5 | 61 | 0.000139024 |
| Solanum lycopersicum | SL4.0ch02 | 3 | CH_sly_88 | 5 | 5 | 0.0000000000388059 |
| Solanum tuberosum | ST4.03ch02 | 3 | CH_stu_353 | 3 | 3 | 0.0000332312 |
| Tripterygium wilfordii | NC_052252.1 | 3 | CH_twi_137 | 4 | 6 | 0.00000265878 |
| Aethionema arabicum | LG-11 | 4 | CH_aar_142 | 3 | 3 | 0.0000619288 |
| Carya illinoinensis | Chr02 | 4 | CH_cil_385 | 4 | 17 | 0.000170089 |
| Helianthus annuus | HanXRQChr17 | 4 | CH_han_65 | 9 | 35 | 0.0000000000000114945 |
| Lotus japonicus | chr2 | 4 | CH_lja_70 | 6 | 16 | 0.0000000046491 |
| Punica granatum | NC_045127.1 | 4 | CH_pgr_92 | 6 | 16 | 0.000000000689212 |
| Populus trichocarpa | Chr13 | 4 | CH_ptr_195 | 4 | 4 | 0.000000112731 |
| Quercus lobata | 5 | 4 | CH_qlo_915 | 3 | 4 | 0.00033275 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_178 | 5 | 8 | 0.00000000069683 |
| Rhododendron simsii | chr04 | 4 | CH_rsi_299 | 4 | 9 | 0.0000102369 |
| Salix brachista | GWHAAZH00000013 | 4 | CH_sbr_118 | 4 | 4 | 0.0000000554137 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1078 | 5 | 61 | 0.000139024 |
| Solanum lycopersicum | SL4.0ch02 | 4 | CH_sly_88 | 5 | 5 | 0.0000000000388059 |
| Solanum tuberosum | ST4.03ch02 | 4 | CH_stu_353 | 3 | 3 | 0.0000332312 |
| Tripterygium wilfordii | NC_052252.1 | 4 | CH_twi_137 | 4 | 6 | 0.00000265878 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |