Functional clusters

Information

  • Type Gene Ontology
  • Description plastid stroma

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_709 5 7 0.000499471
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_709 5 7 0.000499471

Available child term results

Ontology identifier Description Number of clusters
GO:0000311 plastid large ribosomal subunit 4
GO:0000312 plastid small ribosomal subunit 10
GO:0009508 plastid chromosome 2
GO:0009533 chloroplast stromal thylakoid 2
GO:0009547 plastid ribosome 76
GO:0009570 chloroplast stroma 8
GO:0009571 proplastid stroma 4
GO:0009575 chromoplast stroma 4
GO:0009578 etioplast stroma 12
GO:0010287 plastoglobule 12
GO:0042644 chloroplast nucleoid 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001