Functional clusters

Information

  • Type Gene Ontology
  • Description response to temperature stimulus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Phaseolus vulgaris Chr07 3 CH_pvu_214 5 7 0.000036063
Solanum lycopersicum SL4.0ch09 3 CH_sly_387 5 9 0.000114636
Phaseolus vulgaris Chr07 4 CH_pvu_214 5 7 0.000036063
Solanum lycopersicum SL4.0ch09 4 CH_sly_387 5 9 0.000114636

Available child term results

Ontology identifier Description Number of clusters
GO:0009408 response to heat 22
GO:0009409 response to cold 6
GO:0009631 cold acclimation 4
GO:0010048 vernalization response 14
GO:0010221 negative regulation of vernalization response 8
GO:0010286 heat acclimation 26
GO:0010378 temperature compensation of the circadian clock 2
GO:0016048 detection of temperature stimulus 6
GO:0034605 cellular response to heat 6
GO:0070417 cellular response to cold 10
GO:0071497 cellular response to freezing 8
GO:1900034 regulation of cellular response to heat 6
GO:1900035 negative regulation of cellular response to heat 2
GO:1900036 positive regulation of cellular response to heat 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001