Functional clusters
Information
- Type Gene Ontology
- Description vernalization response
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carpinus fangiana | Cfa06 | 3 | CH_cfa_28 | 6 | 11 | 0.0000000000000119583 |
| Helianthus annuus | HanXRQChr06 | 3 | CH_han_155 | 5 | 11 | 0.000000000507216 |
| Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_120 | 6 | 17 | 0.00000000000264642 |
| Papaver somniferum | NC_039366.1 | 3 | CH_pso_432 | 3 | 5 | 0.0000415182 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_473 | 3 | 6 | 0.0000830145 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_598 | 3 | 9 | 0.000348384 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_46 | 12 | 32 | 1.24768e-28 |
| Carpinus fangiana | Cfa06 | 4 | CH_cfa_28 | 6 | 11 | 0.0000000000000119583 |
| Helianthus annuus | HanXRQChr06 | 4 | CH_han_155 | 5 | 11 | 0.000000000507216 |
| Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_120 | 6 | 17 | 0.00000000000264642 |
| Papaver somniferum | NC_039366.1 | 4 | CH_pso_432 | 3 | 5 | 0.0000415182 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_473 | 3 | 6 | 0.0000830145 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_598 | 3 | 9 | 0.000348384 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_46 | 12 | 32 | 1.24768e-28 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0010221 | negative regulation of vernalization response | 8 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |