Functional clusters

Information

  • Type Gene Ontology
  • Description cell cycle

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Vanilla planifolia CM028161.1 3 CH_vpl_159 7 14 0.0000211867
Vanilla planifolia CM028161.1 4 CH_vpl_159 7 14 0.0000211867

Available child term results

Ontology identifier Description Number of clusters
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 14
GO:0000132 establishment of mitotic spindle orientation 2
GO:0000212 meiotic spindle organization 4
GO:0000278 mitotic cell cycle 16
GO:0000706 meiotic DNA double-strand break processing 4
GO:0000712 resolution of meiotic recombination intermediates 2
GO:0000819 sister chromatid segregation 2
GO:0000911 cytokinesis by cell plate formation 14
GO:0000913 preprophase band assembly 2
GO:0000914 phragmoplast assembly 20
GO:0006279 premeiotic DNA replication 6
GO:0007051 spindle organization 2
GO:0007060 male meiosis chromosome segregation 4
GO:0007064 mitotic sister chromatid cohesion 50
GO:0007065 male meiosis sister chromatid cohesion 4
GO:0007076 mitotic chromosome condensation 6
GO:0007094 mitotic spindle assembly checkpoint signaling 8
GO:0007095 mitotic G2 DNA damage checkpoint signaling 8
GO:0007096 regulation of exit from mitosis 2
GO:0007113 endomitotic cell cycle 12
GO:0007130 synaptonemal complex assembly 4
GO:0007131 reciprocal meiotic recombination 8
GO:0007135 meiosis II 6
GO:0007140 male meiotic nuclear division 2
GO:0007141 male meiosis I 4
GO:0007142 male meiosis II 6
GO:0007143 female meiotic nuclear division 2
GO:0007346 regulation of mitotic cell cycle 14
GO:0009556 microsporogenesis 2
GO:0009833 plant-type primary cell wall biogenesis 4
GO:0010235 guard mother cell cytokinesis 2
GO:0010777 meiotic mismatch repair involved in reciprocal meiotic recombination 8
GO:0010789 meiotic sister chromatid cohesion involved in meiosis I 2
GO:0010845 positive regulation of reciprocal meiotic recombination 2
GO:0010971 positive regulation of G2/M transition of mitotic cell cycle 2
GO:0030071 regulation of mitotic metaphase/anaphase transition 20
GO:0031567 mitotic cell size control checkpoint signaling 6
GO:0031570 DNA integrity checkpoint signaling 4
GO:0032875 regulation of DNA endoreduplication 10
GO:0032876 negative regulation of DNA endoreduplication 2
GO:0032877 positive regulation of DNA endoreduplication 4
GO:0032955 regulation of division septum assembly 24
GO:0033314 mitotic DNA replication checkpoint signaling 16
GO:0033316 meiotic spindle assembly checkpoint signaling 2
GO:0034089 establishment of meiotic sister chromatid cohesion 2
GO:0034090 maintenance of meiotic sister chromatid cohesion 8
GO:0040020 regulation of meiotic nuclear division 2
GO:0042138 meiotic DNA double-strand break formation 10
GO:0045143 homologous chromosome segregation 4
GO:0045787 positive regulation of cell cycle 2
GO:0045839 negative regulation of mitotic nuclear division 4
GO:0045841 negative regulation of mitotic metaphase/anaphase transition 2
GO:0045876 positive regulation of sister chromatid cohesion 10
GO:0045931 positive regulation of mitotic cell cycle 2
GO:0048236 plant-type sporogenesis 16
GO:0051177 meiotic sister chromatid cohesion 2
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 4
GO:0051321 meiotic cell cycle 2
GO:0051455 monopolar spindle attachment to meiosis I kinetochore 2
GO:0051754 meiotic sister chromatid cohesion, centromeric 6
GO:0055047 generative cell mitosis 2
GO:0061780 mitotic cohesin loading 18
GO:0061983 meiosis II cell cycle process 2
GO:0070192 chromosome organization involved in meiotic cell cycle 2
GO:0090173 regulation of synaptonemal complex assembly 6
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint 2
GO:0090306 meiotic spindle assembly 8
GO:0098813 nuclear chromosome segregation 2
GO:0140013 meiotic nuclear division 2
GO:0140014 mitotic nuclear division 8
GO:1901651 regulation of mitotic chromosome decondensation 8
GO:1901673 regulation of mitotic spindle assembly 12
GO:1902979 mitotic DNA replication termination 4
GO:1903046 meiotic cell cycle process 2
GO:1903047 mitotic cell cycle process 4
GO:1903343 positive regulation of meiotic DNA double-strand break formation 2
GO:1990918 double-strand break repair involved in meiotic recombination 2
GO:2000073 regulation of cytokinesis, site selection 4
GO:2000134 negative regulation of G1/S transition of mitotic cell cycle 2
GO:2000711 positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001