Functional clusters
Information
- Type Gene Ontology
- Description regulation of DNA endoreduplication
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carya illinoinensis | Chr01 | 3 | CH_cil_206 | 4 | 5 | 0.000000186895 |
| Quercus lobata | 6 | 3 | CH_qlo_627 | 3 | 3 | 0.0000103959 |
| Sequoiadendron giganteum | chr11 | 3 | CH_sgi_534 | 4 | 6 | 0.0000000201532 |
| Solanum lycopersicum | SL4.0ch11 | 3 | CH_sly_283 | 3 | 3 | 0.0000104593 |
| Solanum pennellii | Spenn-ch11 | 3 | CH_spe_222 | 3 | 3 | 0.000009722 |
| Carya illinoinensis | Chr01 | 4 | CH_cil_206 | 4 | 5 | 0.000000186895 |
| Quercus lobata | 6 | 4 | CH_qlo_627 | 3 | 3 | 0.0000103959 |
| Sequoiadendron giganteum | chr11 | 4 | CH_sgi_534 | 4 | 6 | 0.0000000201532 |
| Solanum lycopersicum | SL4.0ch11 | 4 | CH_sly_283 | 3 | 3 | 0.0000104593 |
| Solanum pennellii | Spenn-ch11 | 4 | CH_spe_222 | 3 | 3 | 0.000009722 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0032876 | negative regulation of DNA endoreduplication | 2 |
| GO:0032877 | positive regulation of DNA endoreduplication | 4 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |