Functional clusters
Information
- Type Gene Ontology
- Description copper ion transport
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC03 | 3 | CH_bca_297 | 3 | 3 | 0.000000664186 |
| Brassica napus | C02 | 3 | CH_bna_227 | 3 | 3 | 0.000000687354 |
| Brassica napus | C09 | 3 | CH_bna_387 | 3 | 7 | 0.0000240444 |
| Brassica oleracea | C2 | 3 | CH_bol_141 | 3 | 3 | 0.000000352573 |
| Cucumis melo | chr12 | 3 | CH_cme_120 | 3 | 4 | 0.00000149514 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2465 | 3 | CH_cqu_238 | 3 | 6 | 0.00000377053 |
| Fragaria vesca | Fvb6 | 3 | CH_fve_360 | 2 | 2 | 0.000589102 |
| Lotus japonicus | chr1 | 3 | CH_lja_352 | 2 | 2 | 0.000715077 |
| Malus domestica | Chr12 | 3 | CH_mdo_241 | 3 | 3 | 0.000000355915 |
| Prunus persica | Pp06 | 3 | CH_ppe_139 | 4 | 6 | 0.0000000013073 |
| Pisum sativum | chr3LG5 | 3 | CH_psa_374 | 2 | 2 | 0.000782452 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 3 | CH_rch_306 | 3 | 4 | 0.00000033372 |
| Salvia bowleyana | GWHASIU00000007 | 3 | CH_sbo_206 | 3 | 4 | 0.000000434684 |
| Salix brachista | GWHAAZH00000006 | 3 | CH_sbr_379 | 2 | 2 | 0.000945209 |
| Trochodendron aralioides | group7 | 3 | CH_tar_145 | 3 | 3 | 0.000000302778 |
| Brassica carinata | ChrC03 | 4 | CH_bca_297 | 3 | 3 | 0.000000664186 |
| Brassica napus | C02 | 4 | CH_bna_227 | 3 | 3 | 0.000000687354 |
| Brassica napus | C09 | 4 | CH_bna_387 | 3 | 7 | 0.0000240444 |
| Brassica oleracea | C2 | 4 | CH_bol_141 | 3 | 3 | 0.000000352573 |
| Cucumis melo | chr12 | 4 | CH_cme_120 | 3 | 4 | 0.00000149514 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2465 | 4 | CH_cqu_238 | 3 | 6 | 0.00000377053 |
| Fragaria vesca | Fvb6 | 4 | CH_fve_360 | 2 | 2 | 0.000589102 |
| Lotus japonicus | chr1 | 4 | CH_lja_352 | 2 | 2 | 0.000715077 |
| Malus domestica | Chr12 | 4 | CH_mdo_241 | 3 | 3 | 0.000000355915 |
| Prunus persica | Pp06 | 4 | CH_ppe_139 | 4 | 6 | 0.0000000013073 |
| Pisum sativum | chr3LG5 | 4 | CH_psa_374 | 2 | 2 | 0.000782452 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 4 | CH_rch_306 | 3 | 4 | 0.00000033372 |
| Salvia bowleyana | GWHASIU00000007 | 4 | CH_sbo_206 | 3 | 4 | 0.000000434684 |
| Salix brachista | GWHAAZH00000006 | 4 | CH_sbr_379 | 2 | 2 | 0.000945209 |
| Trochodendron aralioides | group7 | 4 | CH_tar_145 | 3 | 3 | 0.000000302778 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0035434 | copper ion transmembrane transport | 28 |
| GO:0098705 | copper ion import across plasma membrane | 46 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |