Functional clusters
Information
- Type Gene Ontology
- Description ornithine metabolic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 3 | CH_bvu_172 | 3 | 12 | 0.0000790545 |
| Coffea canephora | chr2 | 3 | CH_ccan_293 | 2 | 3 | 0.000191651 |
| Cucumis melo | chr10 | 3 | CH_cme_121 | 3 | 3 | 0.00000190928 |
| Cucumis sativus L. | chr5 | 3 | CH_csa_125 | 3 | 3 | 0.00000172471 |
| Phaseolus vulgaris | Chr07 | 3 | CH_pvu_259 | 3 | 8 | 0.0000747261 |
| Quercus lobata | 8 | 3 | CH_qlo_653 | 3 | 7 | 0.0000167825 |
| Solanum tuberosum | ST4.03ch08 | 3 | CH_stu_24 | 8 | 9 | 8.41493e-22 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 4 | CH_bvu_172 | 3 | 12 | 0.0000790545 |
| Coffea canephora | chr2 | 4 | CH_ccan_293 | 2 | 3 | 0.000191651 |
| Cucumis melo | chr10 | 4 | CH_cme_121 | 3 | 3 | 0.00000190928 |
| Cucumis sativus L. | chr5 | 4 | CH_csa_125 | 3 | 3 | 0.00000172471 |
| Phaseolus vulgaris | Chr07 | 4 | CH_pvu_259 | 3 | 8 | 0.0000747261 |
| Quercus lobata | 8 | 4 | CH_qlo_653 | 3 | 7 | 0.0000167825 |
| Solanum tuberosum | ST4.03ch08 | 4 | CH_stu_24 | 8 | 9 | 8.41493e-22 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0006592 | ornithine biosynthetic process | 12 |
| GO:0033387 | putrescine biosynthetic process from ornithine | 34 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |