Functional clusters

Information

  • Type Gene Ontology
  • Description DNA-dependent DNA replication

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr7 3 CH_camsi_401 3 3 0.00000638381
Durio zibethinus NW_019167871.1 3 CH_dzi_151 3 3 0.00000367354
Lonicera japonica GWHAAZE00000006 3 CH_lonja_174 4 4 0.00000000197192
Quercus lobata 10 3 CH_qlo_681 3 5 0.0000326064
Rhododendron simsii chr01 3 CH_rsi_98 6 13 0.0000000000076242
Salix brachista GWHAAZH00000013 3 CH_sbr_264 3 7 0.000141555
Sequoiadendron giganteum chr8 3 CH_sgi_337 5 7 0.0000000000180401
Sapria himalayana scaffold99_1336101 3 CH_shi_113 3 4 0.00000713913
Trochodendron aralioides group9 3 CH_tar_232 3 4 0.0000209484
Vanilla planifolia CM028150.1 3 CH_vpl_327 3 8 0.000521488
Camellia sinensis var. sinensis Chr7 4 CH_camsi_401 3 3 0.00000638381
Durio zibethinus NW_019167871.1 4 CH_dzi_151 3 3 0.00000367354
Lonicera japonica GWHAAZE00000006 4 CH_lonja_174 4 4 0.00000000197192
Quercus lobata 10 4 CH_qlo_681 3 5 0.0000326064
Rhododendron simsii chr01 4 CH_rsi_98 6 13 0.0000000000076242
Salix brachista GWHAAZH00000013 4 CH_sbr_264 3 7 0.000141555
Sequoiadendron giganteum chr8 4 CH_sgi_337 5 7 0.0000000000180401
Sapria himalayana scaffold99_1336101 4 CH_shi_113 3 4 0.00000713913
Trochodendron aralioides group9 4 CH_tar_232 3 4 0.0000209484
Vanilla planifolia CM028150.1 4 CH_vpl_327 3 8 0.000521488

Available child term results

Ontology identifier Description Number of clusters
GO:0006264 mitochondrial DNA replication 8
GO:0006268 DNA unwinding involved in DNA replication 2
GO:0006269 DNA replication, synthesis of RNA primer 14
GO:0006270 DNA replication initiation 2
GO:0006273 lagging strand elongation 6
GO:0006279 premeiotic DNA replication 6
GO:0031297 replication fork processing 18
GO:0032875 regulation of DNA endoreduplication 10
GO:0032876 negative regulation of DNA endoreduplication 2
GO:0032877 positive regulation of DNA endoreduplication 4
GO:0033567 DNA replication, Okazaki fragment processing 6
GO:0070716 mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication 4
GO:0071932 replication fork reversal 2
GO:1902979 mitotic DNA replication termination 4
GO:2000104 negative regulation of DNA-dependent DNA replication 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001