Functional clusters
Information
- Type Gene Ontology
- Description response to reactive oxygen species
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Rhododendron simsii | chr12 | 3 | CH_rsi_474 | 3 | 3 | 0.000456933 |
Sequoiadendron giganteum | chr6 | 3 | CH_sgi_296 | 8 | 17 | 0.00000000000217597 |
Rhododendron simsii | chr12 | 4 | CH_rsi_474 | 3 | 3 | 0.000456933 |
Sequoiadendron giganteum | chr6 | 4 | CH_sgi_296 | 8 | 17 | 0.00000000000217597 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0000303 | response to superoxide | 16 |
GO:0000304 | response to singlet oxygen | 18 |
GO:0010193 | response to ozone | 2 |
GO:0010421 | hydrogen peroxide-mediated programmed cell death | 26 |
GO:0019430 | removal of superoxide radicals | 2 |
GO:0034614 | cellular response to reactive oxygen species | 6 |
GO:0042542 | response to hydrogen peroxide | 6 |
GO:0071452 | cellular response to singlet oxygen | 2 |
GO:0071457 | cellular response to ozone | 2 |
GO:0097468 | programmed cell death in response to reactive oxygen species | 4 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |