Functional clusters
Information
- Type Gene Ontology
- Description phosphorelay signal transduction system
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-2 | 3 | CH_aar_128 | 4 | 5 | 0.000024118 |
| Arabidopsis lyrata | scaffold_4 | 3 | CH_aly_224 | 7 | 74 | 0.000093818 |
| Cannabis sativa | NC_044373.1 | 3 | CH_cansat_355 | 3 | 3 | 0.000709761 |
| Chara braunii | BFEA01000143 | 3 | CH_cbr_22 | 7 | 30 | 0.00000000135586 |
| Capsella rubella | scaffold_4 | 3 | CH_cru_231 | 7 | 65 | 0.0000844873 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_885 | 3 | 3 | 0.000908721 |
| Fragaria x ananassa | Fvb2-3 | 3 | CH_fan_429 | 5 | 20 | 0.000225347 |
| Prunus persica | Pp06 | 3 | CH_ppe_129 | 6 | 7 | 0.000000000336405 |
| Papaver somniferum | NC_039367.1 | 3 | CH_pso_687 | 3 | 3 | 0.000816525 |
| Quercus lobata | 9 | 3 | CH_qlo_430 | 5 | 6 | 0.000000102492 |
| Salix brachista | GWHAAZH00000016 | 3 | CH_sbr_195 | 4 | 4 | 0.00000963969 |
| Tarenaya hassleriana | NW_010967884.1 | 3 | CH_tha_148 | 4 | 7 | 0.000321599 |
| Aethionema arabicum | LG-2 | 4 | CH_aar_128 | 4 | 5 | 0.000024118 |
| Arabidopsis lyrata | scaffold_4 | 4 | CH_aly_224 | 7 | 74 | 0.000093818 |
| Cannabis sativa | NC_044373.1 | 4 | CH_cansat_355 | 3 | 3 | 0.000709761 |
| Chara braunii | BFEA01000143 | 4 | CH_cbr_22 | 7 | 30 | 0.00000000135586 |
| Capsella rubella | scaffold_4 | 4 | CH_cru_231 | 7 | 65 | 0.0000844873 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_885 | 3 | 3 | 0.000908721 |
| Fragaria x ananassa | Fvb2-3 | 4 | CH_fan_429 | 5 | 20 | 0.000225347 |
| Prunus persica | Pp06 | 4 | CH_ppe_129 | 6 | 7 | 0.000000000336405 |
| Papaver somniferum | NC_039367.1 | 4 | CH_pso_687 | 3 | 3 | 0.000816525 |
| Quercus lobata | 9 | 4 | CH_qlo_430 | 5 | 6 | 0.000000102492 |
| Salix brachista | GWHAAZH00000016 | 4 | CH_sbr_195 | 4 | 4 | 0.00000963969 |
| Tarenaya hassleriana | NW_010967884.1 | 4 | CH_tha_148 | 4 | 7 | 0.000321599 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0009866 | induced systemic resistance, ethylene mediated signaling pathway | 8 |
| GO:0009873 | ethylene-activated signaling pathway | 216 |
| GO:0010104 | regulation of ethylene-activated signaling pathway | 20 |
| GO:0010105 | negative regulation of ethylene-activated signaling pathway | 12 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |