Functional clusters

Information

  • Type Gene Ontology
  • Description ubiquitin ligase complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Solanum lycopersicum SL4.0ch03 3 CH_sly_73 9 17 0.00000000000414909
Solanum lycopersicum SL4.0ch03 4 CH_sly_73 9 17 0.00000000000414909

Available child term results

Ontology identifier Description Number of clusters
GO:0005680 anaphase-promoting complex 22
GO:0019005 SCF ubiquitin ligase complex 2
GO:0031461 cullin-RING ubiquitin ligase complex 6
GO:0031463 Cul3-RING ubiquitin ligase complex 6
GO:0035102 PRC1 complex 14
GO:0080008 Cul4-RING E3 ubiquitin ligase complex 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001