Functional clusters
Information
- Type Gene Ontology
- Description anaphase-promoting complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00032 | 3 | CH_atr_167 | 3 | 4 | 0.0000172224 |
| Capsicum annuum | PGAv.1.6.scaffold78 | 3 | CH_can_52 | 6 | 6 | 0.00000000000000107181 |
| Coffea canephora | chr2 | 3 | CH_ccan_154 | 3 | 20 | 0.00000753794 |
| Lupinus albus | Lalb_Chr10 | 3 | CH_lal_165 | 3 | 3 | 0.00000231376 |
| Lonicera japonica | GWHAAZE00000008 | 3 | CH_lonja_97 | 5 | 5 | 0.0000000000000764199 |
| Rhododendron simsii | chr12 | 3 | CH_rsi_430 | 3 | 9 | 0.00023828 |
| Sequoiadendron giganteum | chr8 | 3 | CH_sgi_408 | 4 | 4 | 0.000000000347199 |
| Sapria himalayana | scaffold78_2020968 | 3 | CH_shi_101 | 3 | 3 | 0.00000333509 |
| Sapria himalayana | scaffold5_19632047 | 3 | CH_shi_9 | 6 | 10 | 0.0000000000000357129 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_160 | 3 | 3 | 0.00000471484 |
| Vanilla planifolia | CM028154.1 | 3 | CH_vpl_44 | 4 | 4 | 0.00000000086536 |
| Amborella trichopoda | AmTr_v1.0_scaffold00032 | 4 | CH_atr_167 | 3 | 4 | 0.0000172224 |
| Capsicum annuum | PGAv.1.6.scaffold78 | 4 | CH_can_52 | 6 | 6 | 0.00000000000000107181 |
| Coffea canephora | chr2 | 4 | CH_ccan_154 | 3 | 20 | 0.00000753794 |
| Lupinus albus | Lalb_Chr10 | 4 | CH_lal_165 | 3 | 3 | 0.00000231376 |
| Lonicera japonica | GWHAAZE00000008 | 4 | CH_lonja_97 | 5 | 5 | 0.0000000000000764199 |
| Rhododendron simsii | chr12 | 4 | CH_rsi_430 | 3 | 9 | 0.00023828 |
| Sequoiadendron giganteum | chr8 | 4 | CH_sgi_408 | 4 | 4 | 0.000000000347199 |
| Sapria himalayana | scaffold78_2020968 | 4 | CH_shi_101 | 3 | 3 | 0.00000333509 |
| Sapria himalayana | scaffold5_19632047 | 4 | CH_shi_9 | 6 | 10 | 0.0000000000000357129 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_160 | 3 | 3 | 0.00000471484 |
| Vanilla planifolia | CM028154.1 | 4 | CH_vpl_44 | 4 | 4 | 0.00000000086536 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |