Functional clusters

Information

  • Type MapMan
  • Description Enzyme classification.EC_2 transferases

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 1 CH_aly_120 8 14 0.000000135057
Arabidopsis lyrata scaffold_7 1 CH_aly_267 6 11 0.000106873
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_14 30 65 1.06172e-27
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 1 CH_arhy_17 30 70 1.7589e-26
Brassica carinata ChrB01 1 CH_bca_727 10 47 0.000134563
Brassica carinata ChrC09 1 CH_bca_740 10 48 0.000167727
Brassica napus C02 1 CH_bna_146 11 29 0.00000000795848
Brassica oleracea C2 1 CH_bol_102 12 50 0.0000000963037
Brassica oleracea C1 1 CH_bol_323 9 43 0.000275504
Camellia sinensis var. sinensis Chr7 1 CH_camsi_103 16 38 0.0000000000107208
Camellia sinensis var. sinensis Chr11 1 CH_camsi_758 7 13 0.000372481
Cannabis sativa NC_044373.1 1 CH_cansat_106 8 11 0.0000000457951
Capsicum annuum PGAv.1.6.scaffold404 1 CH_can_212 10 29 0.0000107078
Capsicum annuum PGAv.1.6.scaffold298 1 CH_can_453 8 24 0.000846597
Corylus avellana 8 1 CH_cav_117 9 12 0.000000191761
Corylus avellana 9 1 CH_cav_23 20 47 0.000000000000134986
Corylus avellana 1 1 CH_cav_30 13 17 0.00000000000207631
Citrus clementina scaffold_6 1 CH_ccl_155 10 17 0.000000297698
Citrus clementina scaffold_3 1 CH_ccl_216 16 68 0.00000486545
Citrus clementina scaffold_4 1 CH_ccl_474 11 41 0.000769331
Carpinus fangiana Cfa06 1 CH_cfa_170 6 7 0.0000112867
Carpinus fangiana Cfa04 1 CH_cfa_50 11 17 0.0000000000539637
Cardamine hirsuta Chr8 1 CH_chi_79 12 28 0.00000000188841
Cardamine hirsuta Chr7 1 CH_chi_92 12 31 0.00000000830242
Capsella rubella scaffold_5 1 CH_cru_38 19 80 0.000000000000186301
Cucumis sativus L. chr7 1 CH_csa_171 6 9 0.0000131485
Durio zibethinus NW_019168159.1 1 CH_dzi_302 6 12 0.000406179
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_95 15 62 0.00000000931669
Erythranthe guttata scaffold_7 1 CH_egut_391 6 9 0.000242932
Erythranthe guttata scaffold_11 1 CH_egut_474 5 6 0.000825251
Eutrema salsugineum scaffold_10 1 CH_esa_200 6 10 0.000111323
Fragaria x ananassa Fvb6-1 1 CH_fan_530 6 10 0.000462494
Gossypium hirsutum D03 1 CH_ghi_101 15 38 0.00000000000670058
Glycine max Gm18 1 CH_gma_35 22 80 4.15759e-16
Helianthus annuus HanXRQChr14 1 CH_han_248 19 79 0.000000231623
Helianthus annuus HanXRQChr03 1 CH_han_268 8 9 0.000000461437
Helianthus annuus HanXRQChr07 1 CH_han_412 11 29 0.0000339568
Helianthus annuus HanXRQChr11 1 CH_han_671 14 64 0.000563865
Helianthus annuus HanXRQChr03 1 CH_han_705 10 29 0.000607376
Hydrangea macrophylla Hma1.2p1_0026F.1 1 CH_hma_316 5 7 0.000317777
Lotus japonicus chr1 1 CH_lja_28 17 42 0.0000000000000088459
Lotus japonicus chr2 1 CH_lja_67 13 34 0.000000000358955
Lonicera japonica GWHAAZE00000006 1 CH_lonja_622 11 38 0.000642165
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_362 12 52 0.000106664
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_97 18 63 0.00000000019824
Magnolia biondii Chr18 1 CH_mbi_210 15 78 0.000000984022
Malus domestica Chr07 1 CH_mdo_230 10 21 0.000000346554
Medicago truncatula chr7 1 CH_mtr_452 14 75 0.0000109615
Medicago truncatula chr7 1 CH_mtr_563 6 8 0.0000763273
Medicago truncatula chr1 1 CH_mtr_644 11 50 0.00014936
Prunus persica Pp03 1 CH_ppe_130 12 24 0.00000000199671
Prunus persica Pp07 1 CH_ppe_221 16 78 0.00000129431
Phaseolus vulgaris Chr11 1 CH_pvu_178 9 18 0.000000948804
Phaseolus vulgaris Chr08 1 CH_pvu_203 8 14 0.00000295605
Quercus lobata 6 1 CH_qlo_1026 14 61 0.000878285
Quercus lobata 10 1 CH_qlo_375 16 44 0.0000000375905
Rhododendron simsii chr04 1 CH_rsi_60 21 61 0.000000000000151791
Rhododendron simsii chr06 1 CH_rsi_67 21 64 0.000000000000474345
Salvia bowleyana GWHASIU00000006 1 CH_sbo_120 11 29 0.0000000134384
Simmondsia chinensis GWHAASQ00000008 1 CH_sci_79 6 6 0.000000659585
Sechium edule LG03 1 CH_sed_130 6 7 0.00000346928
Sequoiadendron giganteum chr7 1 CH_sgi_296 21 63 0.0000000000429934
Sequoiadendron giganteum chr5 1 CH_sgi_660 14 45 0.00000738813
Solanum pennellii Spenn-ch10 1 CH_spe_540 4 4 0.000838865
Solanum tuberosum ST4.03ch00 1 CH_stu_50 16 30 0.0000000000000102515
Vigna mungo CM024070.1 1 CH_vmu_124 7 10 0.0000015943
Vigna mungo CM024073.1 1 CH_vmu_149 9 27 0.000014386
Vigna mungo CM024070.1 1 CH_vmu_6 23 62 1.88159e-20
Vitis vinifera chr12 1 CH_vvi_298 6 7 0.0000933267
Arabidopsis lyrata scaffold_8 2 CH_aly_120 8 14 0.000000135057
Arabidopsis lyrata scaffold_7 2 CH_aly_267 6 11 0.000106873
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_14 30 65 1.06172e-27
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 2 CH_arhy_17 30 70 1.7589e-26
Brassica carinata ChrB01 2 CH_bca_727 10 47 0.000134563
Brassica carinata ChrC09 2 CH_bca_740 10 48 0.000167727
Brassica oleracea C2 2 CH_bol_102 12 50 0.0000000963037
Brassica oleracea C1 2 CH_bol_323 9 43 0.000275504
Camellia sinensis var. sinensis Chr7 2 CH_camsi_103 16 38 0.0000000000107208
Camellia sinensis var. sinensis Chr11 2 CH_camsi_758 7 13 0.000372481
Cannabis sativa NC_044373.1 2 CH_cansat_106 8 11 0.0000000457951
Capsicum annuum PGAv.1.6.scaffold404 2 CH_can_212 10 29 0.0000107078
Capsicum annuum PGAv.1.6.scaffold298 2 CH_can_453 8 24 0.000846597
Corylus avellana 8 2 CH_cav_117 9 12 0.000000191761
Corylus avellana 9 2 CH_cav_23 20 47 0.000000000000134986
Corylus avellana 1 2 CH_cav_30 13 17 0.00000000000207631
Citrus clementina scaffold_6 2 CH_ccl_155 10 17 0.000000297698
Citrus clementina scaffold_3 2 CH_ccl_216 16 68 0.00000486545
Citrus clementina scaffold_4 2 CH_ccl_474 11 41 0.000769331
Carpinus fangiana Cfa06 2 CH_cfa_170 6 7 0.0000112867
Carpinus fangiana Cfa04 2 CH_cfa_50 11 17 0.0000000000539637
Cardamine hirsuta Chr8 2 CH_chi_79 12 28 0.00000000188841
Cardamine hirsuta Chr7 2 CH_chi_92 12 31 0.00000000830242
Capsella rubella scaffold_5 2 CH_cru_38 19 80 0.000000000000186301
Cucumis sativus L. chr7 2 CH_csa_171 6 9 0.0000131485
Durio zibethinus NW_019168159.1 2 CH_dzi_302 6 12 0.000406179
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_95 15 62 0.00000000931669
Eucalyptus grandis Chr07 2 CH_egr_400 15 33 0.0000000306219
Eucalyptus grandis Chr03 2 CH_egr_432 11 16 0.0000000750635
Erythranthe guttata scaffold_7 2 CH_egut_391 6 9 0.000242932
Erythranthe guttata scaffold_11 2 CH_egut_474 5 6 0.000825251
Eutrema salsugineum scaffold_10 2 CH_esa_200 6 10 0.000111323
Fragaria x ananassa Fvb6-1 2 CH_fan_530 6 10 0.000462494
Gossypium hirsutum D03 2 CH_ghi_101 15 38 0.00000000000670058
Glycine max Gm18 2 CH_gma_35 22 80 4.15759e-16
Helianthus annuus HanXRQChr14 2 CH_han_248 19 79 0.000000231623
Helianthus annuus HanXRQChr03 2 CH_han_268 8 9 0.000000461437
Helianthus annuus HanXRQChr07 2 CH_han_412 11 29 0.0000339568
Helianthus annuus HanXRQChr11 2 CH_han_671 14 64 0.000563865
Helianthus annuus HanXRQChr03 2 CH_han_705 10 29 0.000607376
Hydrangea macrophylla Hma1.2p1_0026F.1 2 CH_hma_316 5 7 0.000317777
Lotus japonicus chr1 2 CH_lja_28 17 42 0.0000000000000088459
Lotus japonicus chr3 2 CH_lja_292 12 72 0.000176841
Lotus japonicus chr2 2 CH_lja_67 13 34 0.000000000358955
Lonicera japonica GWHAAZE00000006 2 CH_lonja_622 11 38 0.000642165
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_362 12 52 0.000106664
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_97 18 63 0.00000000019824
Magnolia biondii Chr18 2 CH_mbi_210 15 78 0.000000984022
Malus domestica Chr07 2 CH_mdo_230 10 21 0.000000346554
Prunus persica Pp03 2 CH_ppe_130 12 24 0.00000000199671
Prunus persica Pp07 2 CH_ppe_221 16 78 0.00000129431
Phaseolus vulgaris Chr11 2 CH_pvu_178 9 18 0.000000948804
Phaseolus vulgaris Chr08 2 CH_pvu_203 8 14 0.00000295605
Quercus lobata 6 2 CH_qlo_1026 14 61 0.000878285
Quercus lobata 10 2 CH_qlo_375 16 44 0.0000000375905
Rhododendron simsii chr04 2 CH_rsi_60 21 61 0.000000000000151791
Rhododendron simsii chr06 2 CH_rsi_67 21 64 0.000000000000474345
Salvia bowleyana GWHASIU00000006 2 CH_sbo_120 11 29 0.0000000134384
Simmondsia chinensis GWHAASQ00000008 2 CH_sci_79 6 6 0.000000659585
Sechium edule LG03 2 CH_sed_130 6 7 0.00000346928
Sequoiadendron giganteum chr7 2 CH_sgi_296 21 63 0.0000000000429934
Sequoiadendron giganteum chr5 2 CH_sgi_660 14 45 0.00000738813
Solanum pennellii Spenn-ch10 2 CH_spe_540 4 4 0.000838865
Solanum tuberosum ST4.03ch00 2 CH_stu_50 16 30 0.0000000000000102515
Vigna mungo CM024070.1 2 CH_vmu_124 7 10 0.0000015943
Vigna mungo CM024073.1 2 CH_vmu_149 9 27 0.000014386
Vigna mungo CM024070.1 2 CH_vmu_6 23 62 1.88159e-20
Vitis vinifera chr12 2 CH_vvi_298 6 7 0.0000933267

Available child term results

Ontology identifier Description Number of clusters
50.2.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group 683
50.2.2 Enzyme classification.EC_2 transferases.EC_2.2 transferase transferring aldehyde or ketonic group 4
50.2.3 Enzyme classification.EC_2 transferases.EC_2.3 acyltransferase 596
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase 1439
50.2.5 Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group 78
50.2.6 Enzyme classification.EC_2 transferases.EC_2.6 transferase transferring nitrogenous group 15
50.2.7 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group 1165
50.2.8 Enzyme classification.EC_2 transferases.EC_2.8 transferase transferring sulfur-containing group 278

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001