Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cucumis sativus L. chr2 1 CH_csa_26 9 43 0.00000000000000518617
Gossypium hirsutum A11 1 CH_ghi_30 12 57 5.53447e-19
Helianthus annuus HanXRQChr04 1 CH_han_249 7 48 0.000000232895
Lotus japonicus Contig00272 1 CH_lja_6 16 23 2.30262e-28
Nelumbo nucifera chr5 1 CH_nnu_84 4 5 0.0000000340602
Quercus lobata 9 1 CH_qlo_132 17 71 0.000000000000013624
Sechium edule LG11 1 CH_sed_157 4 24 0.0000156916
Cucumis sativus L. chr2 2 CH_csa_26 9 43 0.00000000000000518617
Gossypium hirsutum A11 2 CH_ghi_30 12 57 5.53447e-19
Helianthus annuus HanXRQChr04 2 CH_han_249 7 48 0.000000232895
Lotus japonicus Contig00272 2 CH_lja_6 16 23 2.30262e-28
Nelumbo nucifera chr5 2 CH_nnu_84 4 5 0.0000000340602
Quercus lobata 9 2 CH_qlo_132 17 71 0.000000000000013624
Sechium edule LG11 2 CH_sed_157 4 24 0.0000156916

Available child term results

Ontology identifier Description Number of clusters
26.9.2.1.1 External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.effector receptor (NLR) 540
26.9.2.1.2 External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.regulatory protein (ADR) 28
26.9.2.1.3 External stimuli response.pathogen.effector-triggered immunity (ETI) network.TNL-mediated effector-triggered immunity.regulatory protein (NRG) 101

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001