Functional Clusters
Cluster information
- Cluster identifier CH_tpr_175
- Chromosome Tp57577_TGAC_v2_LG1
- E-value 0.00000979252
- Data type MapMan
- Data identifier 19.2.4.3.1
- Data description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.chloroplast-associated protein degradation (CHLORAD).E3 ubiquitin protein ligase (SP1)
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Overview
Clusters table overview
Clusters chromosomal overview
Gene Family Statistics
| Gene family | Num genes total | Num genes species | Num genes cluster | Num species |
|---|---|---|---|---|
| HOM05D001357 | 461 | 4 | 1 | 94 |
| HOM05D071777 | 1 | 1 | 1 | 1 |
| HOM05D013029 | 13 | 2 | 1 | 7 |
| HOM05D001881 | 350 | 3 | 1 | 95 |
| HOM05D003358 | 204 | 5 | 3 | 96 |
| HOM05D002930 | 235 | 2 | 1 | 99 |
| HOM05D000826 | 720 | 13 | 1 | 100 |
| HOM05D000488 | 1094 | 11 | 1 | 96 |
| HOM05D000442 | 1174 | 13 | 1 | 100 |
| HOM05D000149 | 2487 | 36 | 1 | 97 |
| HOM05D001776 | 367 | 5 | 1 | 98 |
| HOM05D006325 | 126 | 3 | 1 | 61 |
| HOM05D005285 | 143 | 4 | 1 | 92 |
| HOM05D002626 | 261 | 3 | 1 | 97 |
| HOM05D012873 | 13 | 1 | 1 | 8 |
| HOM05D005701 | 136 | 2 | 1 | 90 |
| HOM05D000177 | 2122 | 22 | 1 | 100 |
| HOM05D000002 | 26594 | 491 | 1 | 98 |
Gene Information
| In cluster | Gene id | Gene type | Gene family |
|---|---|---|---|
| X | TPR.G13294 | Coding gene | HOM05D001357 |
| X | TPR.G13295 | Coding gene | HOM05D071777 |
| X | TPR.G13296 | Coding gene | HOM05D013029 |
| X | TPR.G13297 | Coding gene | HOM05D001881 |
| V | TPR.G13299 | Coding gene | HOM05D003358 |
| X | TPR.G13301 | Coding gene | HOM05D002930 |
| X | TPR.G13303 | Coding gene | HOM05D000826 |
| X | TPR.G13304 | Coding gene | HOM05D000488 |
| X | TPR.G13305 | Coding gene | HOM05D000442 |
| X | TPR.G13309 | Coding gene | HOM05D000149 |
| X | TPR.G13311 | Coding gene | HOM05D001776 |
| X | TPR.G13312 | Coding gene | HOM05D006325 |
| X | TPR.G13313 | Coding gene | HOM05D005285 |
| X | TPR.G13314 | Coding gene | HOM05D002626 |
| X | TPR.G13315 | Coding gene | HOM05D012873 |
| X | TPR.G13316 | Coding gene | HOM05D005701 |
| X | TPR.G13388 | Coding gene | HOM05D000177 |
| V | TPR.G13400 | Coding gene | HOM05D003358 |
| V | TPR.G13403 | Coding gene | HOM05D003358 |
| X | TPR.G13405 | Coding gene | HOM05D000002 |