Functional clusters

Information

  • Type MapMan
  • Description Protein modification.phosphorylation.TKL protein kinase superfamily.G-Lectin protein kinase families

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 1 CH_arhy_243 6 19 0.000000204921
Camellia sinensis var. sinensis Chr5 1 CH_camsi_480 6 49 0.0000179916
Camellia sinensis var. sinensis Chr7 1 CH_camsi_54 10 38 0.00000000000000474728
Cannabis sativa NC_044379.1 1 CH_cansat_6 12 20 2.02027e-24
Corylus avellana 2 1 CH_cav_208 3 3 0.0000322197
Corylus avellana 5 1 CH_cav_46 7 34 0.000000000131589
Citrus clementina scaffold_2 1 CH_ccl_158 5 11 0.000000388617
Carya illinoinensis Chr03 1 CH_cil_200 6 13 0.0000000467257
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_295 4 8 0.0000481817
Eucalyptus grandis Chr01 1 CH_egr_120 11 17 2.16145e-17
Erythranthe guttata scaffold_8 1 CH_egut_475 3 5 0.000845996
Fragaria x ananassa Fvb6-4 1 CH_fan_281 5 19 0.0000099304
Fragaria x ananassa Fvb6-1 1 CH_fan_603 4 15 0.00078104
Fragaria x ananassa Fvb6-3 1 CH_fan_99 6 16 0.0000000102355
Fragaria vesca Fvb6 1 CH_fve_27 10 33 0.0000000000000114758
Gossypium hirsutum D02 1 CH_ghi_425 4 8 0.0000221413
Gossypium hirsutum A03 1 CH_ghi_440 4 9 0.0000398091
Glycine max Gm08 1 CH_gma_256 6 34 0.00000573403
Glycine max Gm12 1 CH_gma_352 4 8 0.0000734456
Gossypium raimondii Chr05 1 CH_gra_223 4 9 0.0000245668
Lotus japonicus chr3 1 CH_lja_78 6 12 0.00000000125068
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_516 3 3 0.000640841
Lactuca sativa Lsat_1_v8_lg_3 1 CH_lsa_9 14 37 4.7942e-23
Malus domestica Chr09 1 CH_mdo_156 8 58 0.00000000539224
Malus domestica Chr17 1 CH_mdo_702 4 15 0.000588126
Medicago truncatula chr7 1 CH_mtr_46 13 56 2.35241e-18
Nelumbo nucifera chr1 1 CH_nnu_243 5 31 0.0000105816
Petunia axillaris Peaxi162Scf00007 1 CH_pax_172 4 18 0.0000473638
Punica granatum NC_045130.1 1 CH_pgr_75 6 12 0.00000000271729
Prunus persica Pp03 1 CH_ppe_20 13 27 2.24193e-23
Papaver somniferum NC_039363.1 1 CH_pso_180 5 17 0.0000000129132
Populus trichocarpa Chr19 1 CH_ptr_186 6 14 0.000000209644
Phaseolus vulgaris Chr08 1 CH_pvu_319 5 27 0.00010102
Quercus lobata 9 1 CH_qlo_631 8 78 0.0000479267
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_425 7 55 0.0000145125
Salix brachista GWHAAZH00000019 1 CH_sbr_349 3 9 0.000407326
Trifolium pratense Tp57577_TGAC_v2_scaf_350 1 CH_tpr_386 3 7 0.000462227
Vigna mungo CM024079.1 1 CH_vmu_166 4 9 0.0000371992
Vigna mungo CM024070.1 1 CH_vmu_47 8 46 0.000000000520656
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.08 2 CH_arhy_243 6 19 0.000000204921
Camellia sinensis var. sinensis Chr5 2 CH_camsi_480 6 49 0.0000179916
Camellia sinensis var. sinensis Chr7 2 CH_camsi_54 10 38 0.00000000000000474728
Cannabis sativa NC_044379.1 2 CH_cansat_6 12 20 2.02027e-24
Corylus avellana 2 2 CH_cav_208 3 3 0.0000322197
Corylus avellana 5 2 CH_cav_46 7 34 0.000000000131589
Citrus clementina scaffold_2 2 CH_ccl_158 5 11 0.000000388617
Carya illinoinensis Chr03 2 CH_cil_200 6 13 0.0000000467257
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_295 4 8 0.0000481817
Eucalyptus grandis Chr01 2 CH_egr_120 11 17 2.16145e-17
Erythranthe guttata scaffold_8 2 CH_egut_475 3 5 0.000845996
Fragaria x ananassa Fvb6-4 2 CH_fan_281 5 19 0.0000099304
Fragaria x ananassa Fvb6-1 2 CH_fan_603 4 15 0.00078104
Fragaria x ananassa Fvb6-3 2 CH_fan_99 6 16 0.0000000102355
Fragaria vesca Fvb6 2 CH_fve_27 10 33 0.0000000000000114758
Gossypium hirsutum D02 2 CH_ghi_425 4 8 0.0000221413
Gossypium hirsutum A03 2 CH_ghi_440 4 9 0.0000398091
Glycine max Gm08 2 CH_gma_256 6 34 0.00000573403
Glycine max Gm12 2 CH_gma_352 4 8 0.0000734456
Gossypium raimondii Chr05 2 CH_gra_223 4 9 0.0000245668
Lotus japonicus chr3 2 CH_lja_78 6 12 0.00000000125068
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_516 3 3 0.000640841
Lactuca sativa Lsat_1_v8_lg_3 2 CH_lsa_9 14 37 4.7942e-23
Malus domestica Chr09 2 CH_mdo_156 8 58 0.00000000539224
Malus domestica Chr17 2 CH_mdo_702 4 15 0.000588126
Nelumbo nucifera chr1 2 CH_nnu_243 5 31 0.0000105816
Petunia axillaris Peaxi162Scf00007 2 CH_pax_172 4 18 0.0000473638
Punica granatum NC_045130.1 2 CH_pgr_75 6 12 0.00000000271729
Prunus persica Pp03 2 CH_ppe_20 13 27 2.24193e-23
Papaver somniferum NC_039363.1 2 CH_pso_180 5 17 0.0000000129132
Populus trichocarpa Chr19 2 CH_ptr_186 6 14 0.000000209644
Phaseolus vulgaris Chr08 2 CH_pvu_319 5 27 0.00010102
Quercus lobata 9 2 CH_qlo_631 8 78 0.0000479267
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_425 7 55 0.0000145125
Salix brachista GWHAAZH00000019 2 CH_sbr_349 3 9 0.000407326
Trifolium pratense Tp57577_TGAC_v2_scaf_350 2 CH_tpr_386 3 7 0.000462227
Vigna mungo CM024079.1 2 CH_vmu_166 4 9 0.0000371992
Vigna mungo CM024070.1 2 CH_vmu_47 8 46 0.000000000520656

Available child term results

Ontology identifier Description Number of clusters
18.4.1.24.1 Protein modification.phosphorylation.TKL protein kinase superfamily.G-Lectin protein kinase families.protein kinase (SD-1) 438
18.4.1.24.2 Protein modification.phosphorylation.TKL protein kinase superfamily.G-Lectin protein kinase families.protein kinase (SD-2) 143

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001