Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_140 4 43 0.000000531125
Arabidopsis thaliana Chr4 1 CH_ath_351 2 2 0.000286492
Brassica carinata ChrC09 1 CH_bca_1171 2 2 0.000961939
Brassica oleracea C1 1 CH_bol_432 2 2 0.000915212
Brassica rapa A01 1 CH_bra_270 2 2 0.000257588
Capsella rubella scaffold_7 1 CH_cru_167 4 42 0.000000654675
Eutrema salsugineum scaffold_1 1 CH_esa_153 3 24 0.0000703248
Arabidopsis lyrata scaffold_7 2 CH_aly_140 4 43 0.000000531125
Arabidopsis thaliana Chr4 2 CH_ath_351 2 2 0.000286492
Brassica carinata ChrC09 2 CH_bca_1171 2 2 0.000961939
Brassica oleracea C1 2 CH_bol_432 2 2 0.000915212
Brassica rapa A01 2 CH_bra_270 2 2 0.000257588
Capsella rubella scaffold_7 2 CH_cru_167 4 42 0.000000654675
Eutrema salsugineum scaffold_1 2 CH_esa_153 3 24 0.0000703248

Available child term results

Ontology identifier Description Number of clusters
15.3.3.3.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit alpha 13
15.3.3.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit beta 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001