Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_486 2 2 0.000422982
Camellia sinensis var. sinensis Chr6 1 CH_camsi_532 2 2 0.0000458547
Oryza sativa ssp. japonica chr11 1 CH_osa_363 2 2 0.000528123
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_574 2 2 0.000119596
Rhododendron simsii chr09 1 CH_rsi_332 2 2 0.0000645307
Sapria himalayana scaffold32_6892495 1 CH_shi_83 2 2 0.0000571804
Acer truncatum chr3 2 CH_acertr_486 2 2 0.000422982
Camellia sinensis var. sinensis Chr6 2 CH_camsi_532 2 2 0.0000458547
Gossypium hirsutum A07 2 CH_ghi_611 2 2 0.000267016
Oryza sativa ssp. japonica chr11 2 CH_osa_363 2 2 0.000528123
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_574 2 2 0.000119596
Rhododendron simsii chr09 2 CH_rsi_332 2 2 0.0000645307
Sapria himalayana scaffold32_6892495 2 CH_shi_83 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001