Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p02490 Brassica napus
Aa31LG5G2700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.238 Anthoceros agrestis
Actinidia00683 Actinidia chinensis
Ah.08g212400 Amaranthus hybridus
AL6G49740 Arabidopsis lyrata
Aqoxy2G03055 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0H5KQ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4BF7AZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FVA5UA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4ZP24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z5FZN7 Arachis hypogaea
AT4G03200 Arabidopsis thaliana
ATR0706G016 Amborella trichopoda
Atru.chr5.1245 Acer truncatum
AUR62008570 Chenopodium quinoa
AUR62034669 Chenopodium quinoa
BcaB01g01973 Brassica carinata
BcaC04g23994 Brassica carinata
BolC9t53189H Brassica oleracea
BraA09t35896Z Brassica rapa
C09p02590 Brassica napus
CAN.G1777.2 Capsicum annuum
CANSAT25G3411 Cannabis sativa
CARHR251630 Cardamine hirsuta
Carub.0006s3386 Capsella rubella
Ca_09126_v3 Cicer arietinum L.
Cc01_g20450 Coffea canephora
CDE09G1084 Ceratophyllum demersum
Cfa005996 Carpinus fangiana
Ciclev10018836m.g Citrus clementina
CiPaw.07G102700 Carya illinoinensis
ClCG09G006240 Citrullus lanatus
COL.COLO4_08004 Corchorus olitorius
Cpa.g.sc441.2 Carica papaya
Cre07.g331250 Chlamydomonas reinhardtii
CsaV3_7G028900 Cucumis sativus L.
CSS0042056 Camellia sinensis var. sinensis
DCAR_018348 Daucus carota
Dinv33015 Davidia involucrata
Duzib138G1706 Durio zibethinus
ECA236G0218 Erigeron canadensis
EL10Ac6g14352 Beta vulgaris
EL10Ac7g17434 Beta vulgaris
Eucgr.K03449 Eucalyptus grandis
FAN24G1124 Fragaria x ananassa
FAN27G3195 Fragaria x ananassa
FvH4_2g25030 Fragaria vesca
Glyma.03G210900 Glycine max
Glyma.19G208100 Glycine max
Gohir.A11G116600 Gossypium hirsutum
Gohir.D11G121700 Gossypium hirsutum
Gorai.007G130400 Gossypium raimondii
GSVIVG01010978001 Vitis vinifera
HanXRQChr11g0350111 Helianthus annuus
Haze_04852 Corylus avellana
HPP92_011821 Vanilla planifolia
Lalb_Chr18g0047291 Lupinus albus
Lj1A204T33 Lonicera japonica
Lj1A36T49 Lonicera japonica
Lj1g0007269 Lotus japonicus
Lj2C1188T5 Lonicera japonica
Lsat_1_v5_gn_8_54360 Lactuca sativa
Manes.05G066300 Manihot esculenta
Mapoly0086s0039 Marchantia polymorpha
MBI19_g24003_MAGBIO Magnolia biondii
MD03G1280600 Malus domestica
Medtr7g108310 Medicago truncatula
MELO3C016048.2 Cucumis melo
Migut.D00162 Erythranthe guttata
MSTRG.18182 Avicennia marina
Nitab4.5_0001102g0080 Nicotiana tabacum
Nitab4.5_0005245g0010 Nicotiana tabacum
Nn3g21368 Nelumbo nucifera
Oeu034814.1 Olea europaea
Oeu057577.1 Olea europaea
Os01g0935600 Oryza sativa ssp. japonica
Peaxi162Scf00067g01926 Petunia axillaris
PGR044G2096 Punica granatum
PGSC0003DMG400011361 Solanum tuberosum
Phvul.001G204000 Phaseolus vulgaris
Potri.002G209900 Populus trichocarpa
Pp3c3_16890 Physcomitrium patens
Prupe.8G255100 Prunus persica
Psat3g023920 Pisum sativum
PSO170G2241 Papaver somniferum
PSO210G6500 Papaver somniferum
QL12p024497 Quercus lobata
RcHm_v2.0_Chr6g0293001 Rosa chinensis
Rhsim13G0015500 Rhododendron simsii
Sabra02G0150400 Salix brachista
SalBow3G3810 Salvia bowleyana
Sc24g0003880 Simmondsia chinensis
Sed0007225 Sechium edule
SEGI_26615 Sequoiadendron giganteum
SEGI_38220 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00398 Striga asiatica
SMO011G0044 Selaginella moellendorffii
Solyc09g074660.3 Solanum lycopersicum
Sopen09g029540 Solanum pennellii
Sp6g03230 Schrenkiella parvula
TAR362G0905 Trochodendron aralioides
Thecc.01G293400 Theobroma cacao
Thhalv10028434m.g Eutrema salsugineum
TPR.G9287 Trifolium pratense
TWI59G0096 Tripterygium wilfordii
unitig_747.g21791 Utricularia gibba
vmacro02493 Vaccinium macrocarpon
VMungo1383G3032 Vigna mungo
Zm00001eb141990 Zea mays

User provided reference genes

Program Settings