Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22480 Brassica napus
A07p27330 Brassica napus
Aa31LG4G1940 Aethionema arabicum
Actinidia35437 Actinidia chinensis
Actinidia37110 Actinidia chinensis
AL2G39510 Arabidopsis lyrata
Aqoxy1G01594 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I62MMC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QTSH12 Arachis hypogaea
AT1G79050 Arabidopsis thaliana
ATR1098G038 Amborella trichopoda
Atru.chr2.1855 Acer truncatum
AUR62042836 Chenopodium quinoa
BcaB02g07195 Brassica carinata
BcaB05g25169 Brassica carinata
BcaC03g15861 Brassica carinata
BcaC08g45388 Brassica carinata
BolC2t09630H Brassica oleracea
BolC6t38182H Brassica oleracea
BraA02t07253Z Brassica rapa
BraA07t30374Z Brassica rapa
C02p36160 Brassica napus
C06p30190 Brassica napus
CAN.G465.3 Capsicum annuum
CAN.G943.26 Capsicum annuum
CANSAT56G2722 Cannabis sativa
CARHR072710 Cardamine hirsuta
Carub.0002s2592 Capsella rubella
Ca_27452_v3 Cicer arietinum L.
Ca_30829_v3 Cicer arietinum L.
CBR_g44924 Chara braunii
Cc05_g15940 Coffea canephora
CDE11G0592 Ceratophyllum demersum
Cfa019440 Carpinus fangiana
Ciclev10020181m.g Citrus clementina
CiPaw.11G068900 Carya illinoinensis
ClCG11G016290 Citrullus lanatus
COL.COLO4_05072 Corchorus olitorius
Cpa.g.c46822 Carica papaya
Cpa.g.sc10.24 Carica papaya
Cre07.g314650 Chlamydomonas reinhardtii
CsaV3_2G022190 Cucumis sativus L.
CSS0027692 Camellia sinensis var. sinensis
DCAR_019932 Daucus carota
Dinv19627 Davidia involucrata
ECA236G0668 Erigeron canadensis
EL10Ac4g08548 Beta vulgaris
Eucgr.F01448 Eucalyptus grandis
FAN19G0761 Fragaria x ananassa
FAN23G0163 Fragaria x ananassa
FAN26G1325 Fragaria x ananassa
FAN28G2770 Fragaria x ananassa
FvH4_1g27813 Fragaria vesca
Glyma.15G211400 Glycine max
Gohir.A01G037200 Gossypium hirsutum
Gohir.D01G024500 Gossypium hirsutum
Gorai.002G033000 Gossypium raimondii
GSVIVG01020482001 Vitis vinifera
HanXRQChr11g0335181 Helianthus annuus
Haze_08526 Corylus avellana
HPP92_018677 Vanilla planifolia
Hund02293 Selenicereus undatus
Lalb_Chr01g0007041 Lupinus albus
Lalb_Chr03g0031571 Lupinus albus
Lj1C903T8 Lonicera japonica
Lj3g0014555 Lotus japonicus
Lsat_1_v5_gn_7_116141 Lactuca sativa
Manes.15G102600 Manihot esculenta
Mapoly0038s0065 Marchantia polymorpha
MBI18_g28210_MAGBIO Magnolia biondii
MCO15G327 Micromonas commoda
MD09G1277400 Malus domestica
MD17G1270800 Malus domestica
Medtr8g461220 Medicago truncatula
MELO3C010554.2 Cucumis melo
Migut.M01567 Erythranthe guttata
MSTRG.16119 Avicennia marina
Nitab4.5_0000313g0030 Nicotiana tabacum
Nitab4.5_0002475g0070 Nicotiana tabacum
Nn7g37732 Nelumbo nucifera
Oeu003840.1 Olea europaea
Os03g0639700 Oryza sativa ssp. japonica
Peaxi162Scf00232g01125 Petunia axillaris
PGSC0003DMG400022135 Solanum tuberosum
Phvul.011G169700 Phaseolus vulgaris
Potri.001G438900 Populus trichocarpa
Pp3c25_4870 Physcomitrium patens
PRCOL_00000999 Prasinoderma coloniale
Prupe.3G015400 Prunus persica
Psat0s5305g0040 Pisum sativum
PSO541G2560 Papaver somniferum
PSO675G7531 Papaver somniferum
QL04p074759 Quercus lobata
RcHm_v2.0_Chr3g0485071 Rosa chinensis
RcHm_v2.0_Chr3g0488901 Rosa chinensis
RcHm_v2.0_Chr6g0270261 Rosa chinensis
Rhsim06G0237500 Rhododendron simsii
Sabra16G0296800 Salix brachista
SalBow8G3164 Salvia bowleyana
Sc16g0003490 Simmondsia chinensis
Sed0004900 Sechium edule
SEGI_23587 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03575 Striga asiatica
Solyc07g066320.3 Solanum lycopersicum
Sopen07g034500 Solanum pennellii
Sp5g34100 Schrenkiella parvula
TAR626G1529 Trochodendron aralioides
THA.LOC104812350 Tarenaya hassleriana
Thecc.07G156800 Theobroma cacao
Thhalv10018594m.g Eutrema salsugineum
TPR.G16487 Trifolium pratense
TWI18G0131 Tripterygium wilfordii
unitig_37.g12208 Utricularia gibba
vmacro11653 Vaccinium macrocarpon
VMungo1127G1406 Vigna mungo
Zm00001eb050740 Zea mays

User provided reference genes

Program Settings