Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p32890 Brassica napus
Aa31LG1G16080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.588 Anthoceros agrestis
Actinidia11983 Actinidia chinensis
Actinidia36432 Actinidia chinensis
Ah.03g140560 Amaranthus hybridus
AL8G43770 Arabidopsis lyrata
Aqoxy6G02612 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L6JH5D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZP9CR3 Arachis hypogaea
AT5G67530 Arabidopsis thaliana
ATR1153G005 Amborella trichopoda
Atru.chr3.1009 Acer truncatum
AUR62004008 Chenopodium quinoa
AUR62040239 Chenopodium quinoa
BcaB02g09915 Brassica carinata
BolC3t18222H Brassica oleracea
BraA06t26220Z Brassica rapa
C03p59580 Brassica napus
CAN.G1075.36 Capsicum annuum
CARHR280050 Cardamine hirsuta
Carub.0008s2694 Capsella rubella
Ca_24694_v3 Cicer arietinum L.
CBR_g18686 Chara braunii
CBR_g31965 Chara braunii
Cc07_g07080 Coffea canephora
CDE07G1536 Ceratophyllum demersum
Cfa004131 Carpinus fangiana
Ciclev10025214m.g Citrus clementina
CiPaw.01G004600 Carya illinoinensis
ClCG01G017550 Citrullus lanatus
COL.COLO4_11575 Corchorus olitorius
Cpa.g.sc6.18 Carica papaya
Cre10.g457000 Chlamydomonas reinhardtii
CsaV3_6G044090 Cucumis sativus L.
CSS0036973 Camellia sinensis var. sinensis
DCAR_025800 Daucus carota
Dinv26930 Davidia involucrata
ECA246G5277 Erigeron canadensis
EL10Ac6g15620 Beta vulgaris
EL10As2g23225 Beta vulgaris
Eucgr.I00705 Eucalyptus grandis
FAN19G2025 Fragaria x ananassa
FAN23G2810 Fragaria x ananassa
FAN26G3316 Fragaria x ananassa
FAN28G1584 Fragaria x ananassa
FvH4_1g17680 Fragaria vesca
Glyma.01G194100 Glycine max
Glyma.11G047800 Glycine max
Gohir.A12G077300 Gossypium hirsutum
Gohir.D12G075500 Gossypium hirsutum
Gorai.008G083600 Gossypium raimondii
GSVIVG01000108001 Vitis vinifera
GSVIVG01000117001 Vitis vinifera
GSVIVG01007234001 Vitis vinifera
HanXRQChr15g0472631 Helianthus annuus
Haze_15284 Corylus avellana
Hma1.2p1_0852F.1_g228490 Hydrangea macrophylla
Hma1.2p1_0852F.1_g228500 Hydrangea macrophylla
Hma1.2p1_0852F.1_g228510 Hydrangea macrophylla
HPP92_024498 Vanilla planifolia
Hund16400 Selenicereus undatus
Lalb_Chr16g0378861 Lupinus albus
Lj2g0027160 Lotus japonicus
Lj3g0021449 Lotus japonicus
Lj7A97T18 Lonicera japonica
Lsat_1_v5_gn_3_86200 Lactuca sativa
Lsat_1_v5_gn_8_75860 Lactuca sativa
Manes.12G114000 Manihot esculenta
Mapoly0005s0265 Marchantia polymorpha
MBI12_g04926_MAGBIO Magnolia biondii
MBI12_g43206_MAGBIO Magnolia biondii
MCO14G312 Micromonas commoda
MD02G1185800 Malus domestica
MD15G1307700 Malus domestica
Medtr5g015500 Medicago truncatula
MELO3C007631.2 Cucumis melo
Migut.H00349 Erythranthe guttata
MSTRG.23672 Avicennia marina
Nitab4.5_0000142g0040 Nicotiana tabacum
Nitab4.5_0002119g0110 Nicotiana tabacum
Nn5g30589 Nelumbo nucifera
Oeu013322.1 Olea europaea
Oeu014248.1 Olea europaea
Os03g0201100 Oryza sativa ssp. japonica
Peaxi162Scf00548g00659 Petunia axillaris
PGR004G0927 Punica granatum
PGSC0003DMG400021445 Solanum tuberosum
Phvul.002G010800 Phaseolus vulgaris
Potri.005G148900 Populus trichocarpa
Pp3c18_21660 Physcomitrium patens
PRCOL_00004771 Prasinoderma coloniale
Prupe.6G220900 Prunus persica
Psat2g171520 Pisum sativum
PSO541G5893 Papaver somniferum
PSO675G3797 Papaver somniferum
RcHm_v2.0_Chr2g0108011 Rosa chinensis
Rhsim10G0099600 Rhododendron simsii
Sabra05G0118600 Salix brachista
SalBow3G3765 Salvia bowleyana
Sc16g0002880 Simmondsia chinensis
Sed0012214 Sechium edule
SEGI_30666 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07454 Striga asiatica
SMO356G0468 Selaginella moellendorffii
Solyc02g092380.4 Solanum lycopersicum
Sopen02g036930 Solanum pennellii
Sp2g29120 Schrenkiella parvula
TAR381G1287 Trochodendron aralioides
TAR381G1456 Trochodendron aralioides
THA.LOC104827618 Tarenaya hassleriana
Thecc.01G072500 Theobroma cacao
Thhalv10003864m.g Eutrema salsugineum
TPR.G34857 Trifolium pratense
TWI09G0055 Tripterygium wilfordii
TWI73G1111 Tripterygium wilfordii
unitig_699.g19438 Utricularia gibba
vmacro05409 Vaccinium macrocarpon
VMungo1215G0773 Vigna mungo
Zm00001eb007780 Zea mays

User provided reference genes

Program Settings