Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p57510 Brassica napus
Aa31LG7G13760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2172 Anthoceros agrestis
Actinidia08667 Actinidia chinensis
Actinidia34233 Actinidia chinensis
Ah.07g205430 Amaranthus hybridus
AL7G24840 Arabidopsis lyrata
Aqoxy5G04307 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ML7S1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFM2N7 Arachis hypogaea
AT4G27800 Arabidopsis thaliana
ATR0730G092 Amborella trichopoda
Atru.chr12.2247 Acer truncatum
AUR62006071 Chenopodium quinoa
AUR62035556 Chenopodium quinoa
BcaC06g32662 Brassica carinata
BcaC06g32664 Brassica carinata
BolC7t46051H Brassica oleracea
BraA03t14819Z Brassica rapa
C07p55710 Brassica napus
CAN.G481.33 Capsicum annuum
CANSAT21G1313 Cannabis sativa
CARHR235530 Cardamine hirsuta
Carub.0007s1302 Capsella rubella
Ca_16723_v3 Cicer arietinum L.
CBR_g29842 Chara braunii
Cc02_g01340 Coffea canephora
CDE10G0180 Ceratophyllum demersum
CDE10G1005 Ceratophyllum demersum
Cfa016212 Carpinus fangiana
Ciclev10020542m.g Citrus clementina
CiPaw.05G198600 Carya illinoinensis
ClCG05G009060 Citrullus lanatus
COL.COLO4_16796 Corchorus olitorius
Cpa.g.sc3.103 Carica papaya
Cre04.g218150 Chlamydomonas reinhardtii
CsaV3_3G019720 Cucumis sativus L.
CSS0047978 Camellia sinensis var. sinensis
DCAR_010592 Daucus carota
Dinv29259 Davidia involucrata
Duzib068G1272 Durio zibethinus
Duzib205G0724 Durio zibethinus
EL10Ac3g05256 Beta vulgaris
Eucgr.A01447 Eucalyptus grandis
FAN01G1247 Fragaria x ananassa
FAN06G4918 Fragaria x ananassa
FAN10G0385 Fragaria x ananassa
FAN10G3102 Fragaria x ananassa
FvH4_7g32030 Fragaria vesca
Glyma.04G233900 Glycine max
Glyma.06G130900 Glycine max
Gohir.A12G248700 Gossypium hirsutum
Gohir.D12G249500 Gossypium hirsutum
Gorai.008G267600 Gossypium raimondii
GSVIVG01038572001 Vitis vinifera
HanXRQChr07g0192431 Helianthus annuus
HanXRQChr07g0206421 Helianthus annuus
Haze_00232 Corylus avellana
HPP92_023830 Vanilla planifolia
HPP92_023891 Vanilla planifolia
Hund11644 Selenicereus undatus
Lalb_Chr23g0271641 Lupinus albus
Lj1g0017748 Lotus japonicus
Lj3C902G9 Lonicera japonica
Lsat_1_v5_gn_2_136280 Lactuca sativa
Manes.01G040500 Manihot esculenta
Mapoly0045s0082 Marchantia polymorpha
MBI07_g12801_MAGBIO Magnolia biondii
MCO06G295 Micromonas commoda
MD01G1223200 Malus domestica
MD07G1293900 Malus domestica
Medtr3g491830 Medicago truncatula
MELO3C019373.2 Cucumis melo
Migut.F01019 Erythranthe guttata
MSTRG.47 Avicennia marina
Nitab4.5_0000548g0030 Nicotiana tabacum
Nitab4.5_0005491g0020 Nicotiana tabacum
Nn1g00313 Nelumbo nucifera
Oeu037049.1 Olea europaea
Os01g0552300 Oryza sativa ssp. japonica
Peaxi162Scf00740g00224 Petunia axillaris
PGR042G2325 Punica granatum
PGSC0003DMG400018545 Solanum tuberosum
Phvul.009G050800 Phaseolus vulgaris
Potri.015G010600 Populus trichocarpa
Pp3c14_14460 Physcomitrium patens
Pp3c2_5310 Physcomitrium patens
PRCOL_00000843 Prasinoderma coloniale
Prupe.2G313700 Prunus persica
Psat5g075880 Pisum sativum
PSO135G0272 Papaver somniferum
PSO384G1907 Papaver somniferum
QL09p007948 Quercus lobata
RcHm_v2.0_Chr1g0381641 Rosa chinensis
RcHm_v2.0_Chr3g0453351 Rosa chinensis
RcHm_v2.0_Chr5g0046991 Rosa chinensis
Rhsim03G0210800 Rhododendron simsii
Sabra15G0008700 Salix brachista
SalBow2G1196 Salvia bowleyana
Sc13g0009990 Simmondsia chinensis
Sed0016509 Sechium edule
SEGI_07520 Sequoiadendron giganteum
SEGI_24679 Sequoiadendron giganteum
SEGI_30791 Sequoiadendron giganteum
SGA_v2.0_scaffold353G49699 Striga asiatica
SGA_v2.0_scaffold55G19787 Striga asiatica
SMO201G0029 Selaginella moellendorffii
Solyc03g082960.2 Solanum lycopersicum
Sopen03g022770 Solanum pennellii
Sp7g25770 Schrenkiella parvula
TAR629G3378 Trochodendron aralioides
THA.LOC104799965 Tarenaya hassleriana
Thecc.03G201400 Theobroma cacao
Thhalv10025423m.g Eutrema salsugineum
TPR.G33659 Trifolium pratense
TWI14G0570 Tripterygium wilfordii
unitig_52.g16861 Utricularia gibba
vmacro06397 Vaccinium macrocarpon
VMungo1309G0039 Vigna mungo
Zm00001eb162530 Zea mays

User provided reference genes

Program Settings