Gene: Nitab4.5_0000548g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000548g0030
  • Transcript Identifier Nitab4.5_0000548g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000548 : 24373-31678 : negative

Gene Family Information

  • ID HOM05D007331
  • #Genes/#Species 106/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000548g0030.1
  • SR1-identifier Nta06g13670.1

Descriptions

  • Description Protein phosphatase 2C, Protein phosphatase 2C (PP2C)-like domain, Protein phosphatase 2C, manganese/magnesium aspartate binding site
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006470
IEA
InterProprotein dephosphorylation
GO:0042793
ISO
PLAZA Homology (enrichment)plastid transcription HOM05D007331
GO:0080005
ISO
PLAZA Integrative Orthologyphotosystem stoichiometry adjustment AT4G27800
GO:0009767
ISO
PLAZA Integrative Orthologyphotosynthetic electron transport chain AT4G27800
GO:0016311
ISO
PLAZA Integrative Orthologydephosphorylation AT4G27800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016791
IEA
InterProphosphatase activity
GO:0004722
IEA
InterProprotein serine/threonine phosphatase activity
GO:0000287
ISO
PLAZA Integrative Orthologymagnesium ion binding AT4G27800
GO:0030145
ISO
PLAZA Integrative Orthologymanganese ion binding AT4G27800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G27800
GO:0000427
ISO
PLAZA Homology (enrichment)plastid-encoded plastid RNA polymerase complex HOM05D007331
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G27800
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT4G27800
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G27800
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G27800
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G27800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036457 PPM-type phosphatase domain superfamily
IPR001932 PPM-type phosphatase domain
IPR015655 Protein phosphatase 2C family
Mapman id Description
1.1.1.5.1.3 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.regulatory phosphorylation.phosphatase (PPH1/TAP38)
15.6.1.2.3.2 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factor components.component TAC7