Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p47970 Brassica napus
Aa31sc33G30 Aethionema arabicum
Actinidia15687 Actinidia chinensis
Ah.13g068920 Amaranthus hybridus
AL4G36540 Arabidopsis lyrata
AL5G36090 Arabidopsis lyrata
Aqoxy7G02057 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VPFI8Q Arachis hypogaea
AT2G39230 Arabidopsis thaliana
AT3G54980 Arabidopsis thaliana
ATR0782G035 Amborella trichopoda
ATR0782G042 Amborella trichopoda
Atru.chr7.2375 Acer truncatum
AUR62015977 Chenopodium quinoa
AUR62015978 Chenopodium quinoa
AUR62021185 Chenopodium quinoa
AUR62021186 Chenopodium quinoa
BcaB01g00140 Brassica carinata
BcaNung04644 Brassica carinata
BcaNung04645 Brassica carinata
BcaNung04646 Brassica carinata
BcaNung04649 Brassica carinata
BolC8t50627H Brassica oleracea
BraA09t40252Z Brassica rapa
C08p30210 Brassica napus
CAN.G1030.27 Capsicum annuum
CAN.G1030.28 Capsicum annuum
CAN.G1030.29 Capsicum annuum
CAN.G98.23 Capsicum annuum
CANSAT11G2472 Cannabis sativa
CARHR164980 Cardamine hirsuta
Carub.0004s2128 Capsella rubella
Carub.0005s2160 Capsella rubella
Ca_26550_v3 Cicer arietinum L.
Cc11_g01810 Coffea canephora
CDE03G0083 Ceratophyllum demersum
Ciclev10010816m.g Citrus clementina
CiPaw.06G059600 Carya illinoinensis
ClCG02G013330 Citrullus lanatus
COL.COLO4_23984 Corchorus olitorius
Cpa.g.sc1.269 Carica papaya
CsaV3_2G017510 Cucumis sativus L.
CSS0042508 Camellia sinensis var. sinensis
CSS0048694 Camellia sinensis var. sinensis
DCAR_006446 Daucus carota
DCAR_006447 Daucus carota
Dinv11617 Davidia involucrata
Duzib150G0458 Durio zibethinus
Duzib168G0154 Durio zibethinus
EL10Ac3g05636 Beta vulgaris
Eucgr.I01690 Eucalyptus grandis
FAN08G1130 Fragaria x ananassa
FAN18G3351 Fragaria x ananassa
FvH4_5g25890 Fragaria vesca
Glyma.07G068500 Glycine max
Gohir.A10G099700 Gossypium hirsutum
Gohir.D10G088500 Gossypium hirsutum
Gorai.011G097400 Gossypium raimondii
GSVIVG01035807001 Vitis vinifera
HanXRQChr02g0050751 Helianthus annuus
Haze_21571 Corylus avellana
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla
HPP92_023171 Vanilla planifolia
Hund04746 Selenicereus undatus
Lalb_Chr07g0185941 Lupinus albus
Lj7C718G17 Lonicera japonica
LjContig00081g0002723 Lotus japonicus
Lsat_1_v5_gn_6_22161 Lactuca sativa
Manes.03G017400 Manihot esculenta
MBI01_g07128_MAGBIO Magnolia biondii
MBI01_g07129_MAGBIO Magnolia biondii
MBI08_g04815_MAGBIO Magnolia biondii
MD04G1151000 Malus domestica
MD12G1164900 Malus domestica
Medtr4g076530 Medicago truncatula
Medtr4g076540 Medicago truncatula
MELO3C020947.2 Cucumis melo
Migut.A00317 Erythranthe guttata
MSTRG.11775 Avicennia marina
MSTRG.25851 Avicennia marina
Nitab4.5_0000151g0190 Nicotiana tabacum
Nitab4.5_0001669g0010 Nicotiana tabacum
Nitab4.5_0003498g0090 Nicotiana tabacum
Nitab4.5_0003498g0100 Nicotiana tabacum
Nitab4.5_0008089g0010 Nicotiana tabacum
Nn3g20345 Nelumbo nucifera
Nn5g27729 Nelumbo nucifera
Oeu008766.1 Olea europaea
Oeu032501.2 Olea europaea
Oeu047396.1 Olea europaea
Os01g0611900 Oryza sativa ssp. japonica
Peaxi162Scf00341g00062 Petunia axillaris
PGR142G2973 Punica granatum
PGSC0003DMG400023145 Solanum tuberosum
Phvul.009G090400 Phaseolus vulgaris
Potri.006G250700 Populus trichocarpa
Prupe.6G275900 Prunus persica
Psat7g237040 Pisum sativum
QL05p049822 Quercus lobata
QL08p000602 Quercus lobata
RcHm_v2.0_Chr4g0410561 Rosa chinensis
RcHm_v2.0_Chr4g0410571 Rosa chinensis
RcHm_v2.0_Chr6g0264781 Rosa chinensis
RcHm_v2.0_Chr7g0216391 Rosa chinensis
RcHm_v2.0_Chr7g0216401 Rosa chinensis
Sabra06G0196000 Salix brachista
Sc25g0000480 Simmondsia chinensis
Sed0001816 Sechium edule
Sed0018262 Sechium edule
SGA_v2.0_scaffold22G09931 Striga asiatica
Solyc08g067060.2 Solanum lycopersicum
Sopen08g021010 Solanum pennellii
Sp4g21560 Schrenkiella parvula
SpUn0018_0110 Schrenkiella parvula
THA.LOC104809984 Tarenaya hassleriana
THA.LOC104824237 Tarenaya hassleriana
Thecc.09G149000 Theobroma cacao
Thhalv10010921m.g Eutrema salsugineum
Thhalv10017602m.g Eutrema salsugineum
TPR.G5606 Trifolium pratense
TWI63G1321 Tripterygium wilfordii
VMungo0331G1641 Vigna mungo

User provided reference genes

Program Settings